Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QL286_RS13635 Genome accession   NZ_CP125299
Coordinates   2761548..2761724 (-) Length   58 a.a.
NCBI ID   WP_194221184.1    Uniprot ID   -
Organism   Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2756548..2766724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL286_RS13610 - 2756766..2757512 (-) 747 WP_194221188.1 YjbA family protein -
  QL286_RS13615 fabF 2758611..2759849 (-) 1239 WP_283152354.1 beta-ketoacyl-ACP synthase II -
  QL286_RS13620 - 2759881..2760819 (-) 939 WP_283152355.1 beta-ketoacyl-ACP synthase III -
  QL286_RS13625 - 2760998..2761360 (+) 363 WP_194221185.1 YppG family protein -
  QL286_RS13630 - 2761392..2761535 (-) 144 WP_159782169.1 hypothetical protein -
  QL286_RS13635 comZ 2761548..2761724 (-) 177 WP_194221184.1 ComZ family protein Regulator
  QL286_RS13640 - 2761769..2762323 (-) 555 WP_283152356.1 DinB family protein -
  QL286_RS13645 - 2762340..2763257 (-) 918 WP_283152357.1 NAD(P)-dependent oxidoreductase -
  QL286_RS13650 - 2763365..2764555 (+) 1191 WP_283152358.1 FAD-binding oxidoreductase -
  QL286_RS13655 - 2764557..2765279 (-) 723 WP_283152359.1 hypothetical protein -
  QL286_RS13660 - 2765492..2765953 (+) 462 WP_283152360.1 TspO/MBR family protein -
  QL286_RS13665 - 2766020..2766208 (+) 189 WP_283152361.1 YjzD family protein -
  QL286_RS13670 - 2766268..2766456 (-) 189 WP_283152362.1 YjzC family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6822.91 Da        Isoelectric Point: 4.0706

>NTDB_id=830991 QL286_RS13635 WP_194221184.1 2761548..2761724(-) (comZ) [Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821]
MDQNMKFMQIAMKYLPEAKQSLGEQEIELDLEKMQPLLQLFLKAMEDAYELGKQDAQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=830991 QL286_RS13635 WP_194221184.1 2761548..2761724(-) (comZ) [Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821]
ATGGATCAAAACATGAAATTTATGCAAATTGCAATGAAGTATTTACCTGAAGCGAAGCAGTCGCTTGGAGAACAAGAAAT
AGAATTAGATCTTGAAAAGATGCAGCCATTGCTTCAGCTCTTTCTTAAGGCTATGGAAGATGCTTATGAGCTCGGGAAGC
AGGATGCACAGGAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(2-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

53.571

96.552

0.517