Detailed information NTG0830947

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QEN71_RS01660
• Genome accession: NZ_CP125295
• Coordinates: 366820..367989 (-)
• Length: 389 a.a.
• NCBI ID: WP_201651309.1
• Uniprot ID: -
• Organism: Paraburkholderia sabiae strain LMG 24235
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 361820..372989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QEN71_RS01640 (QEN71_01640)	leuA	361932..363590 (-)	1659	WP_201651313.1	2-isopropylmalate synthase	-
QEN71_RS01645 (QEN71_01645)	ybiB	364110..365078 (-)	969	WP_201651312.1	DNA-binding protein YbiB	-
QEN71_RS01650 (QEN71_01650)	-	365333..366031 (+)	699	WP_201651311.1	fumarylacetoacetate hydrolase family protein	-
QEN71_RS01655 (QEN71_01655)	maiA	366066..366710 (+)	645	WP_201651310.1	maleylacetoacetate isomerase	-
QEN71_RS01660 (QEN71_01660)	pilA	366820..367989 (-)	1170	WP_201651309.1	signal recognition particle-docking protein FtsY	Machinery gene
QEN71_RS01665 (QEN71_01665)	rsmD	368296..368910 (+)	615	WP_201651308.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QEN71_RS01670 (QEN71_01670)	coaD	369028..369534 (+)	507	WP_201651307.1	pantetheine-phosphate adenylyltransferase	-
QEN71_RS01675 (QEN71_01675)	-	369683..369940 (+)	258	WP_201651306.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QEN71_RS01680 (QEN71_01680)	hisC	370012..371091 (-)	1080	WP_201651305.1	histidinol-phosphate transaminase	-
QEN71_RS01685 (QEN71_01685)	pth	371125..371727 (-)	603	WP_147233949.1	aminoacyl-tRNA hydrolase	-
QEN71_RS01690 (QEN71_01690)	-	371848..372459 (-)	612	WP_201651304.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 41875.44 Da
• Isoelectric Point: 4.5486

>NTDB_id=830947 QEN71_RS01660 WP_201651309.1 366820..367989(-) (pilA) [Paraburkholderia sabiae strain LMG 24235]
MFSFFKRFKGSKAPDDTPDASQTDSGADVDMQDVAEPEAPAAPRQQALPDSADAPEFDPNYVPDAADFEDSDDENEANVE
IVPPPVPEAAAKRTWLTRLRSGLSKTSSSITGIFVGTKIDEDLYEELETALLMSDAGVDATEYLLETLREKVRAERLTDP
QQVKTALRTLLVDLLKPLEKSLTLGHYHPTVMMIAGVNGAGKTTSIGKLAKHMQRFNQSVLLAAGDTFRAAAREQLAIWG
ERNNVTVVQQESGDPAAVIFDAVGAARARKINVVMADTAGRLPTQLHLMEELRKVKRVVGKAMDGAPHEVLLVIDANTGQ
NALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFSDALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=830947 QEN71_RS01660 WP_201651309.1 366820..367989(-) (pilA) [Paraburkholderia sabiae strain LMG 24235]
ATGTTCAGCTTTTTCAAACGATTCAAGGGTTCCAAGGCGCCCGACGACACGCCTGATGCGTCGCAGACCGATTCCGGCGC
CGACGTCGACATGCAGGACGTGGCTGAGCCGGAAGCGCCCGCCGCGCCCCGTCAGCAAGCGCTGCCGGATTCCGCCGACG
CGCCCGAGTTCGACCCGAACTACGTCCCCGACGCCGCCGATTTCGAAGATTCGGACGACGAAAACGAAGCGAACGTCGAA
ATCGTCCCGCCGCCCGTTCCCGAAGCAGCCGCGAAACGCACGTGGCTCACGCGCCTGCGCAGCGGCCTGTCGAAAACGAG
TTCGAGCATCACGGGTATTTTCGTCGGCACGAAGATCGACGAAGACCTGTACGAAGAACTCGAAACGGCGCTGCTGATGT
CCGACGCGGGCGTCGACGCGACGGAATATCTGCTCGAAACGCTGCGCGAAAAAGTGCGCGCCGAGCGCCTCACCGATCCG
CAGCAGGTCAAGACCGCGCTGCGCACGCTGCTCGTCGATCTGCTGAAGCCGCTCGAAAAGTCGCTGACGCTCGGCCACTA
CCATCCGACCGTGATGATGATCGCGGGCGTCAACGGCGCGGGCAAAACGACGAGCATCGGCAAGCTGGCCAAGCATATGC
AGCGCTTCAACCAGTCGGTGCTGCTCGCAGCGGGCGACACGTTCCGCGCCGCCGCGCGCGAACAGCTCGCGATCTGGGGC
GAGCGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGATCCCGCGGCGGTGATTTTCGATGCTGTCGGCGCAGCGCG
CGCCCGCAAGATCAACGTCGTGATGGCGGACACGGCCGGCCGTCTGCCGACGCAGCTTCATCTGATGGAAGAACTGCGCA
AGGTAAAGCGCGTGGTCGGCAAGGCGATGGACGGCGCGCCGCACGAAGTGCTGCTCGTCATCGATGCGAACACCGGTCAG
AATGCGCTCGCGCAAGTGAAGGCATTCGACGACGCGCTCGGGCTCACGGGCCTGATCGTGACGAAGCTCGATGGCACGGC
GAAGGGCGGCATTCTTGCGGCGATTGCGCGGCAACGTCCTGTGCCCGTGTACTTCATTGGAGTCGGCGAGAAGGTCGAAG
ACCTGCAACCGTTCAGCGCAGAAGAGTTCTCGGATGCGTTGCTCGGGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (189-388)

• SRP54-type protein, helical bundle domain (SRP54_N) (108-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.983	100	0.571