Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QL281_RS20170 Genome accession   NZ_CP125292
Coordinates   3776198..3776662 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM117797     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3771198..3781662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS20150 (QL281_20150) kinA 3771665..3773485 (+) 1821 WP_144459492.1 sporulation histidine kinase KinA -
  QL281_RS20155 (QL281_20155) dapX 3773495..3774676 (-) 1182 WP_017697268.1 aminotransferase A -
  QL281_RS20160 (QL281_20160) - 3774878..3775039 (-) 162 WP_003245246.1 hypothetical protein -
  QL281_RS20165 (QL281_20165) cheV 3775243..3776154 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  QL281_RS20170 (QL281_20170) kre 3776198..3776662 (-) 465 WP_003232406.1 YkyB family protein Regulator
  QL281_RS20175 (QL281_20175) ykuC 3776788..3778080 (-) 1293 WP_017697269.1 MFS transporter -
  QL281_RS20180 (QL281_20180) ltdD 3778156..3778650 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  QL281_RS20185 (QL281_20185) ppeE 3778707..3779567 (-) 861 WP_017697271.1 metallophosphoesterase -
  QL281_RS20190 (QL281_20190) fadH 3779710..3780474 (+) 765 WP_017697272.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=830939 QL281_RS20170 WP_003232406.1 3776198..3776662(-) (kre) [Bacillus subtilis strain SRCM117797]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=830939 QL281_RS20170 WP_003232406.1 3776198..3776662(-) (kre) [Bacillus subtilis strain SRCM117797]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCCAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAACCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1