Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QL281_RS14555 Genome accession   NZ_CP125292
Coordinates   2703547..2703687 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117797     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2698547..2708687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS14550 (QL281_14550) srfAB 2700411..2703503 (+) 3093 Protein_2828 surfactin non-ribosomal peptide synthetase SrfAB -
  QL281_RS14555 (QL281_14555) comS 2703547..2703687 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=830918 QL281_RS14555 WP_225910706.1 2703547..2703687(+) (comS) [Bacillus subtilis strain SRCM117797]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=830918 QL281_RS14555 WP_225910706.1 2703547..2703687(+) (comS) [Bacillus subtilis strain SRCM117797]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978