Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QLX65_RS07695 Genome accession   NZ_CP125289
Coordinates   1442743..1443339 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain SF334     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1437743..1448339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX65_RS07665 (QLX65_07665) - 1437957..1438412 (+) 456 WP_044053160.1 flavodoxin -
  QLX65_RS07670 (QLX65_07670) dapD 1438494..1439204 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QLX65_RS07675 (QLX65_07675) - 1439275..1440399 (+) 1125 WP_283002607.1 N-acetyldiaminopimelate deacetylase -
  QLX65_RS07680 (QLX65_07680) - 1440460..1440705 (+) 246 WP_003154596.1 YkuS family protein -
  QLX65_RS07685 (QLX65_07685) - 1440739..1441545 (-) 807 WP_265423031.1 mechanosensitive ion channel family protein -
  QLX65_RS07690 (QLX65_07690) - 1441833..1442291 (+) 459 WP_014304924.1 TlpA disulfide reductase family protein -
  QLX65_RS07695 (QLX65_07695) rok 1442743..1443339 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  QLX65_RS07700 (QLX65_07700) - 1443360..1444352 (-) 993 WP_283002608.1 sporulation protein -
  QLX65_RS07705 (QLX65_07705) - 1444498..1445100 (+) 603 WP_283002609.1 molybdenum cofactor guanylyltransferase -
  QLX65_RS07710 (QLX65_07710) - 1445152..1446171 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  QLX65_RS07715 (QLX65_07715) glp 1446189..1447481 (+) 1293 WP_015388302.1 gephyrin-like molybdotransferase Glp -
  QLX65_RS07720 (QLX65_07720) mobB 1447442..1447963 (+) 522 WP_044053164.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=830739 QLX65_RS07695 WP_003154591.1 1442743..1443339(+) (rok) [Bacillus velezensis strain SF334]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=830739 QLX65_RS07695 WP_003154591.1 1442743..1443339(+) (rok) [Bacillus velezensis strain SF334]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843