Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   H7680_RS07275 Genome accession   NZ_AP023394
Coordinates   1470209..1471246 (-) Length   345 a.a.
NCBI ID   WP_150336268.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain 159     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1465209..1476246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7680_RS07245 (SDSE159_14190) - 1465642..1466871 (+) 1230 WP_003054206.1 IS110 family transposase -
  H7680_RS10595 - 1467202..1467653 (-) 452 Protein_1387 ATP-binding cassette domain-containing protein -
  H7680_RS07260 (SDSE159_14220) rbsD 1467669..1468067 (-) 399 WP_003051896.1 D-ribose pyranase -
  H7680_RS07265 (SDSE159_14230) rbsK 1468042..1468953 (-) 912 WP_065361269.1 ribokinase -
  H7680_RS07270 (SDSE159_14240) - 1468946..1469929 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  H7680_RS07275 (SDSE159_14250) sepM 1470209..1471246 (-) 1038 WP_150336268.1 SepM family pheromone-processing serine protease Regulator
  H7680_RS07280 (SDSE159_14260) coaD 1471233..1471724 (-) 492 WP_003051905.1 pantetheine-phosphate adenylyltransferase -
  H7680_RS07285 (SDSE159_14270) rsmD 1471714..1472253 (-) 540 WP_014612463.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H7680_RS07290 (SDSE159_14280) asnA 1472447..1473439 (-) 993 WP_003055679.1 aspartate--ammonia ligase -
  H7680_RS07295 (SDSE159_14290) arcC 1473765..1474715 (-) 951 WP_014612465.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37615.19 Da        Isoelectric Point: 9.5393

>NTDB_id=83071 H7680_RS07275 WP_150336268.1 1470209..1471246(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
MKTIKKIKWWLINLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAANAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=83071 H7680_RS07275 WP_150336268.1 1470209..1471246(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAATCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGACAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAAATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.594

100

0.716


Multiple sequence alignment