Detailed information NTG0830677

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: R3F75_RS47270
• Genome accession: NZ_CP139649
• Coordinates: 9518017..9519882 (-)
• Length: 621 a.a.
• NCBI ID: WP_039155469.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain CNPSo 34
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 9513017..9524882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3F75_RS47250 (R3F75_47240)	-	9514252..9514806 (-)	555	WP_232674492.1	carboxymuconolactone decarboxylase family protein	-
R3F75_RS47255 (R3F75_47245)	-	9514918..9516081 (-)	1164	WP_039155473.1	PLP-dependent cysteine synthase family protein	-
R3F75_RS47260 (R3F75_47250)	-	9516188..9516652 (-)	465	WP_038959792.1	Lrp/AsnC family transcriptional regulator	-
R3F75_RS47265 (R3F75_47255)	-	9516816..9517829 (+)	1014	WP_039155471.1	1-aminocyclopropane-1-carboxylate deaminase	-
R3F75_RS47270 (R3F75_47260)	recQ	9518017..9519882 (-)	1866	WP_039155469.1	DNA helicase RecQ	Machinery gene
R3F75_RS47275 (R3F75_47265)	-	9520154..9520897 (-)	744	WP_038934348.1	polysaccharide deacetylase family protein	-
R3F75_RS47280 (R3F75_47270)	-	9521001..9522002 (-)	1002	WP_039155466.1	homoserine O-succinyltransferase MetA	-
R3F75_RS47285 (R3F75_47275)	-	9522015..9523316 (-)	1302	WP_039155464.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein	-

Sequence

Protein

• Length: 621 a.a.
• Molecular weight: 68101.87 Da
• Isoelectric Point: 7.6111

>NTDB_id=830677 R3F75_RS47270 WP_039155469.1 9518017..9519882(-) (recQ) [Bradyrhizobium japonicum strain CNPSo 34]
MSAPSTAPLPAPANGRDALSVLHSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLI
ALMRDQVAGLLEAGVNAAALNSSLTLQEASDIERRLIAGDLDLLYVAPERLVTPRCLSLLAQAKVALFAIDEAHCVSQWG
HDFRPEYVGLSIIAERFPNVPRIALTATADELTRKEIVERLRLVDSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERH
AGDAGVVYCLSRNRVEEVAAALDDAGIAALPYHAGLDSSIRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHLDLP
KSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDESSGSDDFKRVSIGKLDALVGLAETAQCRRKRLLAYFGEAE
TAHNCGNCDNCLTPPKMRDGKVLAQKLLSCAYRTGQRFGAMQLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQWRTV
LRQLVAMGHLYSDSEAFGALKLTESARGVLRGETEVWLREEAPGTRVRASRAKSRRGDLAPAANAPQGDVDPELRARLRS
WRSDIARERGVPAYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVKTR

Nucleotide

• Length: 1866 bp

>NTDB_id=830677 R3F75_RS47270 WP_039155469.1 9518017..9519882(-) (recQ) [Bradyrhizobium japonicum strain CNPSo 34]
ATGTCCGCTCCCTCCACCGCCCCGCTGCCTGCGCCGGCCAACGGCCGCGACGCGCTGTCGGTGCTGCATTCGGTGTTCGG
CCTGCCGGGGTTCCGCGGCGCGCAGGGCGAGATCATCCGGCACGTCACGGATGGCGGCAATTGCCTGGTCTTGATGCCGA
CCGGCGGCGGCAAGTCGCTGTGCTATCAATTGCCGTCACTGCTGCGCGAAGGCTGCGGCATCGTGGTGTCGCCGCTGATC
GCGCTGATGCGCGACCAGGTCGCCGGCCTGCTCGAGGCCGGGGTCAACGCCGCGGCGCTGAACTCGTCGCTGACGCTGCA
GGAAGCTTCCGACATCGAGCGCCGCCTGATCGCGGGTGATCTCGACCTGCTCTATGTCGCGCCGGAACGGCTGGTGACGC
CGCGCTGCCTGTCGCTGCTGGCGCAGGCGAAGGTCGCGCTTTTCGCGATCGACGAGGCGCATTGCGTCTCGCAATGGGGC
CATGACTTCCGCCCCGAATATGTCGGCCTCTCCATCATCGCCGAACGTTTTCCGAACGTTCCGCGCATCGCGCTGACCGC
GACCGCCGACGAGCTGACGCGCAAGGAGATCGTCGAGCGCCTCCGGCTCGTCGACAGCCCGCAATTCGTCTCCAGCTTCG
ATCGCCCGAATATCCGCTACGAGATCGTCGACAAGCGCAACGCGGTGTCGCAGCTGAAAGAATTCATCCGGGAGCGGCAT
GCGGGCGACGCCGGCGTGGTCTATTGCCTGTCGCGCAATCGCGTCGAGGAGGTTGCCGCCGCGCTCGACGACGCCGGCAT
TGCGGCGCTGCCCTATCACGCCGGGCTCGACAGCAGCATACGCTCGCGCAACCAGGACCGGTTCCTCAACGAGGACGGCA
TCGTCATCGTCGCGACCATCGCCTTCGGCATGGGCATCGACAAGCCGGACGTGCGCTTCGTCGCCCATCTCGATCTGCCC
AAGAGCATCGAGGCCTATTATCAGGAGACGGGGCGCGCCGGCCGCGACGGCAAGCCGTCGGCGGCCTGGATGGCCTATGG
TCTTTCCGACATCGTGCAGCAGCGGCGCATGATCGACGAGTCCAGCGGTTCTGACGATTTCAAGCGGGTGTCGATCGGCA
AGCTCGACGCACTGGTCGGCCTCGCCGAGACCGCGCAGTGCCGGCGCAAGCGGCTGCTCGCCTATTTCGGCGAGGCGGAG
ACGGCGCACAATTGCGGCAATTGCGACAACTGCCTGACGCCGCCCAAGATGCGCGACGGCAAGGTGCTGGCGCAGAAGCT
GCTGTCCTGCGCCTATCGCACCGGGCAGCGTTTCGGTGCGATGCAGCTGATCGACGTGCTGATTGGTCGCCTTACCGAGA
AGGTGACGCAGTTCGGCCACGACAAATTGTCCGTGTTCGGCATCGGGCGCGAGCTGAACGAGAAGCAGTGGCGCACGGTG
TTGCGGCAGCTGGTGGCGATGGGGCATTTGTACAGCGACAGCGAGGCGTTCGGCGCGCTGAAGCTGACGGAGAGCGCGCG
CGGCGTGCTACGCGGCGAGACCGAGGTGTGGCTGCGCGAGGAAGCGCCGGGCACGCGTGTTCGCGCGAGCCGGGCGAAAT
CCCGCCGTGGTGACCTCGCGCCTGCGGCCAACGCGCCGCAGGGCGATGTCGATCCCGAATTGCGGGCGCGGCTGAGGTCC
TGGCGTTCGGACATCGCGCGCGAACGCGGCGTGCCGGCCTATGTCGTGCTGCACGATGCCACCATCGACGGCATCGTCCG
GGCCTGGCCAACGACGCTGGACGAGCTCCGCAACGTGCCCGGCATCGGCGACAAGAAGCTCGAGCATTACGGCGACGAGC
TGCTTCAGATCGTCAAGACGCGGTAG

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (34-190)

• HRDC domain (HRDC) (553-618)

• RQC domain (RQC) (414-522)

• RecQ zinc-binding (RecQ_Zn_bind) (349-412)

• Helicase conserved C-terminal domain (Helicase_C) (229-336)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	37.851	97.424	0.369