Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QLX50_RS11360 Genome accession   NZ_CP125283
Coordinates   2376812..2377612 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain IFST-221     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2371812..2382612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX50_RS11330 (QLX50_11330) - 2372341..2372973 (+) 633 WP_014418348.1 helix-turn-helix domain-containing protein -
  QLX50_RS11335 (QLX50_11335) - 2373272..2373409 (+) 138 WP_162918042.1 hypothetical protein -
  QLX50_RS11340 (QLX50_11340) - 2373503..2374621 (+) 1119 WP_032863662.1 NADH-dependent flavin oxidoreductase -
  QLX50_RS11345 (QLX50_11345) - 2374748..2374960 (+) 213 WP_007408362.1 spore germination protein -
  QLX50_RS11350 (QLX50_11350) - 2375093..2375305 (+) 213 WP_038459145.1 spore germination protein -
  QLX50_RS11355 (QLX50_11355) alr 2375482..2376663 (+) 1182 WP_044802573.1 alanine racemase -
  QLX50_RS11360 (QLX50_11360) spo0A 2376812..2377612 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  QLX50_RS11365 (QLX50_11365) spoIVB 2377893..2379173 (-) 1281 WP_007408360.1 SpoIVB peptidase -
  QLX50_RS11370 (QLX50_11370) recN 2379337..2381067 (-) 1731 WP_032874060.1 DNA repair protein RecN Machinery gene
  QLX50_RS11375 (QLX50_11375) argR 2381099..2381548 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  QLX50_RS11380 (QLX50_11380) - 2381645..2382490 (-) 846 WP_044802572.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=830613 QLX50_RS11360 WP_003153177.1 2376812..2377612(-) (spo0A) [Bacillus velezensis strain IFST-221]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=830613 QLX50_RS11360 WP_003153177.1 2376812..2377612(-) (spo0A) [Bacillus velezensis strain IFST-221]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTAACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTTATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97