Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QLX50_RS07150 Genome accession   NZ_CP125283
Coordinates   1368991..1369587 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain IFST-221     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1363991..1374587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX50_RS07120 (QLX50_07120) - 1364205..1364660 (+) 456 WP_282999996.1 flavodoxin -
  QLX50_RS07125 (QLX50_07125) dapD 1364742..1365452 (+) 711 WP_044801352.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QLX50_RS07130 (QLX50_07130) - 1365523..1366647 (+) 1125 WP_012117444.1 N-acetyldiaminopimelate deacetylase -
  QLX50_RS07135 (QLX50_07135) - 1366708..1366953 (+) 246 WP_003154596.1 YkuS family protein -
  QLX50_RS07140 (QLX50_07140) - 1366987..1367793 (-) 807 WP_044801353.1 mechanosensitive ion channel family protein -
  QLX50_RS07145 (QLX50_07145) - 1368081..1368539 (+) 459 WP_044801354.1 TlpA disulfide reductase family protein -
  QLX50_RS07150 (QLX50_07150) rok 1368991..1369587 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  QLX50_RS07155 (QLX50_07155) - 1369611..1370603 (-) 993 WP_044801355.1 hypothetical protein -
  QLX50_RS07160 (QLX50_07160) - 1370749..1371351 (+) 603 WP_044801356.1 molybdenum cofactor guanylyltransferase -
  QLX50_RS07165 (QLX50_07165) - 1371403..1372422 (+) 1020 WP_017417685.1 molybdopterin-synthase adenylyltransferase MoeB -
  QLX50_RS07170 (QLX50_07170) glp 1372440..1373732 (+) 1293 WP_007611114.1 gephyrin-like molybdotransferase Glp -
  QLX50_RS07175 (QLX50_07175) mobB 1373693..1374214 (+) 522 WP_044801357.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=830606 QLX50_RS07150 WP_003154591.1 1368991..1369587(+) (rok) [Bacillus velezensis strain IFST-221]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=830606 QLX50_RS07150 WP_003154591.1 1368991..1369587(+) (rok) [Bacillus velezensis strain IFST-221]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843