Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QLX50_RS07050 Genome accession   NZ_CP125283
Coordinates   1353125..1353589 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain IFST-221     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348125..1358589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX50_RS07030 (QLX50_07030) - 1348606..1350426 (+) 1821 WP_017417673.1 PAS domain-containing protein -
  QLX50_RS07035 (QLX50_07035) - 1350451..1351620 (-) 1170 WP_007611083.1 aminotransferase A -
  QLX50_RS07040 (QLX50_07040) - 1351821..1351982 (-) 162 WP_007409608.1 hypothetical protein -
  QLX50_RS07045 (QLX50_07045) cheV 1352171..1353082 (+) 912 WP_038457848.1 chemotaxis protein CheV -
  QLX50_RS07050 (QLX50_07050) kre 1353125..1353589 (-) 465 WP_003154622.1 YkyB family protein Regulator
  QLX50_RS07055 (QLX50_07055) - 1353712..1355004 (-) 1293 WP_007611093.1 MFS transporter -
  QLX50_RS07060 (QLX50_07060) - 1355081..1355575 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  QLX50_RS07065 (QLX50_07065) - 1355650..1356513 (-) 864 WP_044801346.1 metallophosphoesterase -
  QLX50_RS07070 (QLX50_07070) fadH 1356657..1357421 (+) 765 WP_044801347.1 2,4-dienoyl-CoA reductase -
  QLX50_RS07075 (QLX50_07075) - 1357535..1358083 (+) 549 WP_044801348.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=830605 QLX50_RS07050 WP_003154622.1 1353125..1353589(-) (kre) [Bacillus velezensis strain IFST-221]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=830605 QLX50_RS07050 WP_003154622.1 1353125..1353589(-) (kre) [Bacillus velezensis strain IFST-221]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929