Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QLX50_RS05505 Genome accession   NZ_CP125283
Coordinates   1079635..1080588 (+) Length   317 a.a.
NCBI ID   WP_007610578.1    Uniprot ID   -
Organism   Bacillus velezensis strain IFST-221     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1074635..1085588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX50_RS05480 (QLX50_05480) argF 1076454..1077425 (+) 972 WP_044802803.1 ornithine carbamoyltransferase -
  QLX50_RS05485 (QLX50_05485) - 1077501..1077680 (+) 180 WP_003155070.1 YjzC family protein -
  QLX50_RS05490 (QLX50_05490) - 1077717..1077902 (-) 186 WP_007409129.1 YjzD family protein -
  QLX50_RS05495 (QLX50_05495) - 1078162..1078896 (+) 735 WP_007610576.1 hypothetical protein -
  QLX50_RS05500 (QLX50_05500) - 1078979..1079545 (+) 567 WP_044802804.1 hypothetical protein -
  QLX50_RS05505 (QLX50_05505) med 1079635..1080588 (+) 954 WP_007610578.1 BMP family ABC transporter substrate-binding protein Regulator
  QLX50_RS05510 (QLX50_05510) comZ 1080601..1080792 (+) 192 WP_003155061.1 ComZ family protein Regulator
  QLX50_RS05515 (QLX50_05515) - 1080821..1081039 (-) 219 WP_007610579.1 hypothetical protein -
  QLX50_RS05520 (QLX50_05520) - 1081207..1082145 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  QLX50_RS05525 (QLX50_05525) fabF 1082168..1083406 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  QLX50_RS05530 (QLX50_05530) - 1083489..1084274 (+) 786 WP_282999981.1 DUF2268 domain-containing protein -
  QLX50_RS05535 (QLX50_05535) - 1084448..1085434 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35357.02 Da        Isoelectric Point: 4.6686

>NTDB_id=830597 QLX50_RS05505 WP_007610578.1 1079635..1080588(+) (med) [Bacillus velezensis strain IFST-221]
MITRLVMIFSLLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=830597 QLX50_RS05505 WP_007610578.1 1079635..1080588(+) (med) [Bacillus velezensis strain IFST-221]
TTGATCACCAGGCTTGTCATGATCTTTTCTCTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782