Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QLX50_RS04090 Genome accession   NZ_CP125283
Coordinates   820305..821096 (+) Length   263 a.a.
NCBI ID   WP_044801980.1    Uniprot ID   -
Organism   Bacillus velezensis strain IFST-221     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 815305..826096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX50_RS04065 (QLX50_04065) - 817300..818184 (+) 885 WP_044801983.1 PhzF family phenazine biosynthesis isomerase -
  QLX50_RS04070 (QLX50_04070) - 818261..818845 (+) 585 WP_044801982.1 nitroreductase -
  QLX50_RS04075 (QLX50_04075) - 818884..819075 (-) 192 WP_003155508.1 YfhD family protein -
  QLX50_RS04080 (QLX50_04080) - 819146..819256 (-) 111 WP_003155504.1 YfhE family protein -
  QLX50_RS04085 (QLX50_04085) - 819314..820213 (-) 900 WP_044801981.1 TIGR01777 family oxidoreductase -
  QLX50_RS04090 (QLX50_04090) recX 820305..821096 (+) 792 WP_044801980.1 recombination regulator RecX Regulator
  QLX50_RS04095 (QLX50_04095) - 821103..821417 (+) 315 WP_007610157.1 YfhH family protein -
  QLX50_RS04100 (QLX50_04100) - 821562..822755 (+) 1194 WP_130571783.1 MFS transporter -
  QLX50_RS04105 (QLX50_04105) - 822795..823184 (-) 390 WP_044801979.1 DUF2606 family protein -
  QLX50_RS04110 (QLX50_04110) - 823147..824058 (-) 912 WP_044801978.1 serine protease -
  QLX50_RS04115 (QLX50_04115) - 824203..824355 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  QLX50_RS04120 (QLX50_04120) - 824479..824748 (+) 270 WP_003155492.1 YfhJ family protein -
  QLX50_RS04125 (QLX50_04125) - 824880..825407 (+) 528 WP_044801977.1 SH3 domain-containing protein -
  QLX50_RS04130 (QLX50_04130) - 825493..825828 (+) 336 WP_044801976.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31020.26 Da        Isoelectric Point: 6.3797

>NTDB_id=830589 QLX50_RS04090 WP_044801980.1 820305..821096(+) (recX) [Bacillus velezensis strain IFST-221]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRYDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKKYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=830589 QLX50_RS04090 WP_044801980.1 820305..821096(+) (recX) [Bacillus velezensis strain IFST-221]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTATGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGACACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAGGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAGAATGACGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTTAAAAAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

78.707

100

0.787