Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   OH685_RS04625 Genome accession   NZ_CP125227
Coordinates   950146..952374 (-) Length   742 a.a.
NCBI ID   WP_039763451.1    Uniprot ID   A0A6H0FY43
Organism   Acinetobacter pittii strain SO1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 945146..957374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH685_RS04605 (OH685_04645) cbpA 945334..946290 (-) 957 WP_078220080.1 DnaJ C-terminal domain-containing protein -
  OH685_RS04610 (OH685_04650) - 946437..947048 (-) 612 WP_005079293.1 LysE family translocator -
  OH685_RS04615 (OH685_04655) hslO 947186..948061 (-) 876 WP_078220081.1 Hsp33 family molecular chaperone HslO -
  OH685_RS04620 (OH685_04660) kefB 948225..950069 (-) 1845 WP_282463848.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  OH685_RS04625 (OH685_04665) priA 950146..952374 (-) 2229 WP_039763451.1 primosomal protein N' Machinery gene
  OH685_RS04630 (OH685_04670) gspF 952523..953728 (+) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  OH685_RS04635 (OH685_04675) gspG 953752..954267 (+) 516 WP_019768050.1 type II secretion system major pseudopilin GspG -
  OH685_RS04640 (OH685_04680) - 954535..954879 (+) 345 WP_282463849.1 hypothetical protein -
  OH685_RS04645 (OH685_04685) csaA 955025..955363 (+) 339 WP_005065945.1 tRNA-binding protein -
  OH685_RS04650 (OH685_04690) lnt 955365..956924 (-) 1560 WP_282463850.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84025.76 Da        Isoelectric Point: 8.4592

>NTDB_id=830444 OH685_RS04625 WP_039763451.1 950146..952374(-) (priA) [Acinetobacter pittii strain SO1]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=830444 OH685_RS04625 WP_039763451.1 950146..952374(-) (priA) [Acinetobacter pittii strain SO1]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCGCAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCCCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCGCACGACTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAACAAGTACTGGTGTTAGTCCCAGAAATTGGTTT
AACCCCTCAAACGATTTCTCGTTTTAAATCGCGTTTTAACTGTGATATTGCTCTATTACACTCTGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCTCAGACGGGCAAAGCATCTATTATTTTAGGAACACGCTCAGCCATTTATACGCCG
CTGCCACGTTTAGGTCTCATCATTTTAGATGAAGAGCATGACCTGTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCATTGTACCGAGGCCACTTGCAAAATTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATAGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAATCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATAGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGGTGGCAAGCAA
ATTGTCCACATTGTGATGCACATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTACCCGATCACTGCCCTGAATGCCAGCAAAAAAGCCTAAAAACCCTAGGTGCTGGAACAGCTAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGACCGTATTCATCAAAACAAACCAACAATTTTGCTGGGCACTCAAATGTTGGCAAAAGGCCATCATTTTCCA
CACGTCACTTTAGTTGCCATTTTAGATATTGATGCTGGGTTACTTAGTGTCGACATCCGTGCGCCAGAGCGTACGGCGCA
GCTGATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACATAAAGGCCATGTTTATTTACAAACCCTAAGACCAGATC
ACCCTTTACTCACCACGCTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAATCTAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGAAATTGTTGATATTTGGGGTCCGATTCCAGCACCGATGGAACGTAAAGCTG
GGCGCTACCGCGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGGCAATGGTGGTCACAA
TTGGTTCATGCGCCGCGCCAGCATCAACTCAGATTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0FY43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.248

100

0.982