Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   OH685_RS04110 Genome accession   NZ_CP125227
Coordinates   839144..839470 (+) Length   108 a.a.
NCBI ID   WP_000801427.1    Uniprot ID   N9J3X5
Organism   Acinetobacter pittii strain SO1     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 834144..844470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH685_RS04085 (OH685_04120) hemC 834759..835676 (+) 918 WP_199114149.1 hydroxymethylbilane synthase -
  OH685_RS04090 (OH685_04125) hemD 835680..836447 (+) 768 WP_233735308.1 uroporphyrinogen-III synthase -
  OH685_RS04095 (OH685_04130) - 836456..837298 (+) 843 WP_032006827.1 hypothetical protein -
  OH685_RS04100 (OH685_04135) - 837308..838501 (+) 1194 WP_282463825.1 heme biosynthesis protein HemY -
  OH685_RS04105 (OH685_04140) - 838509..838949 (+) 441 WP_282463826.1 thioesterase family protein -
  OH685_RS04110 (OH685_04145) hns 839144..839470 (+) 327 WP_000801427.1 H-NS histone family protein Regulator
  OH685_RS04115 (OH685_04150) gspN 839805..840548 (+) 744 WP_002121195.1 type II secretion system protein N -
  OH685_RS04120 (OH685_04155) - 840548..841384 (+) 837 WP_005079413.1 type II secretion system protein N -
  OH685_RS04125 (OH685_04160) gspD 841426..843702 (+) 2277 WP_032005866.1 type II secretion system secretin GspD -
  OH685_RS04130 (OH685_04165) - 843744..844370 (+) 627 WP_126646270.1 FHA domain-containing protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12462.12 Da        Isoelectric Point: 5.0524

>NTDB_id=830440 OH685_RS04110 WP_000801427.1 839144..839470(+) (hns) [Acinetobacter pittii strain SO1]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=830440 OH685_RS04110 WP_000801427.1 839144..839470(+) (hns) [Acinetobacter pittii strain SO1]
ATGAAACCGGATATCAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGTAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTCAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACTCGTAAATCTGTTGAGCCTCGTTACCGCAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAAGGCGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9J3X5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

100

100

1