Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   R6Z04_RS00220 Genome accession   NZ_CP139440
Coordinates   41250..42077 (+) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain GUCC4     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36250..47077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6Z04_RS00195 (R6Z04_00195) efpO 37313..38755 (+) 1443 WP_003243352.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  R6Z04_RS00200 (R6Z04_00200) tmk 38752..39390 (+) 639 WP_003243137.1 dTMP kinase -
  R6Z04_RS00205 (R6Z04_00205) darA 39464..39793 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  R6Z04_RS00210 (R6Z04_00210) yaaR 39806..40246 (+) 441 WP_009966249.1 YaaR family protein -
  R6Z04_RS00215 (R6Z04_00215) holB 40258..41247 (+) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  R6Z04_RS00220 (R6Z04_00220) yaaT 41250..42077 (+) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  R6Z04_RS00225 (R6Z04_00225) yabA 42092..42451 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  R6Z04_RS00230 (R6Z04_00230) trmNF 42510..43253 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  R6Z04_RS00235 (R6Z04_00235) yazA 43240..43539 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  R6Z04_RS00240 (R6Z04_00240) rsmI 43514..44392 (+) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  R6Z04_RS00245 (R6Z04_00245) abrB 44441..44731 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=830398 R6Z04_RS00220 WP_003243571.1 41250..42077(+) (yaaT) [Bacillus subtilis strain GUCC4]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=830398 R6Z04_RS00220 WP_003243571.1 41250..42077(+) (yaaT) [Bacillus subtilis strain GUCC4]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1