Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | SPM78_RS05520 | Genome accession | NZ_CP139424 |
| Coordinates | 1147610..1147966 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain 136790 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1142610..1152966
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPM78_RS05495 (SPM78_05495) | fabF | 1142822..1144066 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| SPM78_RS05500 (SPM78_05500) | pabC | 1144066..1144881 (+) | 816 | WP_003091129.1 | aminodeoxychorismate lyase | - |
| SPM78_RS05505 (SPM78_05505) | mltG | 1144887..1145936 (+) | 1050 | WP_003091127.1 | endolytic transglycosylase MltG | - |
| SPM78_RS05510 (SPM78_05510) | tmk | 1145965..1146597 (+) | 633 | WP_003122486.1 | dTMP kinase | - |
| SPM78_RS05515 (SPM78_05515) | - | 1146590..1147576 (+) | 987 | WP_003091122.1 | DNA polymerase III subunit delta' | - |
| SPM78_RS05520 (SPM78_05520) | pilZ | 1147610..1147966 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| SPM78_RS05525 (SPM78_05525) | - | 1147981..1148757 (+) | 777 | WP_023095396.1 | TatD family hydrolase | - |
| SPM78_RS05530 (SPM78_05530) | - | 1148983..1150116 (-) | 1134 | WP_003091115.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| SPM78_RS05535 (SPM78_05535) | - | 1150202..1150840 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| SPM78_RS05540 (SPM78_05540) | - | 1150990..1151886 (+) | 897 | WP_003091113.1 | radical SAM protein | - |
| SPM78_RS05545 (SPM78_05545) | - | 1151951..1152583 (+) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=830309 SPM78_RS05520 WP_003091119.1 1147610..1147966(+) (pilZ) [Pseudomonas aeruginosa strain 136790]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=830309 SPM78_RS05520 WP_003091119.1 1147610..1147966(+) (pilZ) [Pseudomonas aeruginosa strain 136790]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |