Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   H7678_RS07770 Genome accession   NZ_AP023393
Coordinates   1570870..1571907 (-) Length   345 a.a.
NCBI ID   WP_065355406.1    Uniprot ID   A0AB38XZ54
Organism   Streptococcus dysgalactiae subsp. equisimilis strain 89     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1565870..1576907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7678_RS07740 (SDSE89_15130) - 1566302..1567531 (+) 1230 WP_003054206.1 IS110 family transposase -
  H7678_RS10790 (SDSE89_15140) - 1567758..1568119 (-) 362 Protein_1484 ATP-binding cassette domain-containing protein -
  H7678_RS10710 (SDSE89_15150) - 1568134..1568313 (-) 180 WP_003053686.1 ATP-binding cassette domain-containing protein -
  H7678_RS07755 (SDSE89_15160) rbsD 1568329..1568727 (-) 399 WP_184010280.1 D-ribose pyranase -
  H7678_RS07760 (SDSE89_15170) rbsK 1568702..1569613 (-) 912 WP_003053680.1 ribokinase -
  H7678_RS07765 (SDSE89_15180) - 1569606..1570589 (-) 984 WP_184010283.1 LacI family DNA-binding transcriptional regulator -
  H7678_RS07770 (SDSE89_15190) sepM 1570870..1571907 (-) 1038 WP_065355406.1 SepM family pheromone-processing serine protease Regulator
  H7678_RS07775 (SDSE89_15200) coaD 1571894..1572385 (-) 492 WP_003051905.1 pantetheine-phosphate adenylyltransferase -
  H7678_RS07780 (SDSE89_15210) rsmD 1572375..1572914 (-) 540 WP_014612463.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H7678_RS07785 (SDSE89_15220) asnA 1573108..1574100 (-) 993 WP_065355407.1 aspartate--ammonia ligase -
  H7678_RS07790 (SDSE89_15230) arcC 1574426..1575376 (-) 951 WP_014612465.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37630.20 Da        Isoelectric Point: 9.4270

>NTDB_id=83013 H7678_RS07770 WP_065355406.1 1570870..1571907(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
MKTIKKIKWWLINLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSAEKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=83013 H7678_RS07770 WP_065355406.1 1570870..1571907(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAATCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAACAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGAGAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.304

100

0.713


Multiple sequence alignment