Detailed information NTG0830029

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: SLQ83_RS15785
• Genome accession: NZ_CP139208
• Coordinates: 3265135..3266583 (-)
• Length: 482 a.a.
• NCBI ID: WP_000778198.1
• Uniprot ID: A0ABX6CC58
• Organism: Acinetobacter baumannii strain HNNY86G
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3260135..3271583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SLQ83_RS15760 (SLQ83_15760)	hisD	3260897..3262186 (-)	1290	WP_001253719.1	histidinol dehydrogenase	-
SLQ83_RS15765 (SLQ83_15765)	hisG	3262292..3262975 (-)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
SLQ83_RS15770 (SLQ83_15770)	murA	3262975..3264231 (-)	1257	WP_000357157.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
SLQ83_RS15775 (SLQ83_15775)	ibaG	3264238..3264489 (-)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
SLQ83_RS15780 (SLQ83_15780)	hpf	3264628..3264966 (-)	339	WP_001167461.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
SLQ83_RS15785 (SLQ83_15785)	rpoN/rpoN1	3265135..3266583 (-)	1449	WP_000778198.1	RNA polymerase factor sigma-54	Machinery gene

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55091.98 Da
• Isoelectric Point: 4.6950

>NTDB_id=830029 SLQ83_RS15785 WP_000778198.1 3265135..3266583(-) (rpoN/rpoN1) [Acinetobacter baumannii strain HNNY86G]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRHVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=830029 SLQ83_RS15785 WP_000778198.1 3265135..3266583(-) (rpoN/rpoN1) [Acinetobacter baumannii strain HNNY86G]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACACAAAGAAACTGATGACCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCACGTTCACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTACATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTCTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATTGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTA
GAGAAACTGAATATTTGAAAGAAGCTAGAAGTCTACTTCAATATTATGAATTACTGATTGCGAATGACCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAGGAACAATTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAATCCTGATGTAATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGAGCAGATCAAAGTGATGAT
AATTTATATCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGACACAAAACATTATTGAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCCTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACCACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACAGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
AATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAGG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (113-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.333	100	0.459