Detailed information NTG0829962

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: QLH56_RS05575
• Genome accession: NZ_CP125107
• Coordinates: 1127424..1128695 (+)
• Length: 423 a.a.
• NCBI ID: WP_003100430.1
• Uniprot ID: -
• Organism: Streptococcus iniae strain DFSM220524
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Genomic Context

Location: 1122424..1133695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLH56_RS05555 (QLH56_05555)	mutL	1122949..1124907 (+)	1959	WP_003100434.1	DNA mismatch repair endonuclease MutL	-
QLH56_RS05560 (QLH56_05560)	-	1124917..1126140 (+)	1224	WP_003100433.1	MFS transporter	-
QLH56_RS05565 (QLH56_05565)	ruvA	1126142..1126735 (+)	594	WP_003100432.1	Holliday junction branch migration protein RuvA	-
QLH56_RS05570 (QLH56_05570)	-	1126738..1127289 (+)	552	WP_003100431.1	DNA-3-methyladenine glycosylase I	-
QLH56_RS05575 (QLH56_05575)	cinA	1127424..1128695 (+)	1272	WP_003100430.1	competence/damage-inducible protein A	Machinery gene
QLH56_RS05580 (QLH56_05580)	recA	1128777..1129910 (+)	1134	WP_003100429.1	recombinase RecA	Machinery gene
QLH56_RS05585 (QLH56_05585)	spx	1130505..1130903 (+)	399	WP_003100427.1	transcriptional regulator Spx	-
QLH56_RS05590 (QLH56_05590)	-	1131015..1131284 (+)	270	WP_003100426.1	IreB family regulatory phosphoprotein	-
QLH56_RS05595 (QLH56_05595)	ruvX	1131281..1131700 (+)	420	WP_037582983.1	Holliday junction resolvase RuvX	-
QLH56_RS05600 (QLH56_05600)	-	1131711..1132010 (+)	300	WP_003100423.1	DUF1292 domain-containing protein	-
QLH56_RS05605 (QLH56_05605)	-	1132188..1132685 (+)	498	WP_003100421.1	ferrous iron transport protein A	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 45769.39 Da
• Isoelectric Point: 4.9542

>NTDB_id=829962 QLH56_RS05575 WP_003100430.1 1127424..1128695(+) (cinA) [Streptococcus iniae strain DFSM220524]
MKAELIAVGTELLTGQILNTNAQFLSEKMAEIGVDVYFQTAVGDNEERLLSVIDIASKRSHLIILCGGLGPTEDDLTKQT
LAKYLGKNLIFDSDASLKLDDFFSSRPSHSRTPNNERQAQVIEGSIPIQNLTGLAVGGLIEVNGITYVVLPGPPNELRPM
VNQGLIPLLSGNQSALYSKVLRFFGIGESQLVTVLADIIENQTDPTIAPYAKIGEVTLRLSTKGRNQSEAYQKLADFEKK
LLALTTLDGSYLSEFLYGYGEDNSLAKEVFQLLKKHTKTLTAAESLTAGMFQSSLADFSGSSAVFNGGFVTYSITEKSKM
LGIPLELLEQHGVVSAFTAEQMAMKAKTLTDSDIAISLTGVAGPDSLEEQPVGTVYIGIASQETVESFKIFIGGRSRSDI
RKIACMHAFNLVRKTLLKGENLV

Nucleotide

• Length: 1272 bp

>NTDB_id=829962 QLH56_RS05575 WP_003100430.1 1127424..1128695(+) (cinA) [Streptococcus iniae strain DFSM220524]
ATGAAGGCGGAATTGATTGCTGTTGGAACAGAATTATTAACAGGACAAATTCTAAATACCAATGCCCAATTTTTGTCTGA
GAAGATGGCTGAGATTGGAGTCGATGTTTATTTTCAAACGGCTGTTGGAGATAACGAGGAACGGCTCTTATCAGTGATTG
ACATTGCAAGTAAGCGAAGTCATTTAATTATTTTGTGTGGTGGCCTTGGACCTACAGAAGATGATTTAACAAAGCAAACT
CTTGCTAAGTATTTAGGAAAAAATCTGATTTTTGATTCTGATGCTAGCTTAAAATTGGATGATTTTTTCTCCAGTCGACC
AAGTCATTCAAGAACCCCTAATAATGAGCGTCAAGCTCAAGTGATTGAAGGCTCAATCCCAATTCAAAATCTTACGGGCC
TTGCAGTAGGTGGCTTGATTGAGGTAAATGGGATTACTTATGTTGTTTTACCTGGACCACCAAATGAATTAAGACCAATG
GTTAATCAAGGTCTCATTCCGTTACTATCGGGTAATCAAAGTGCTTTGTACTCTAAAGTGTTGCGTTTTTTTGGTATCGG
TGAGAGTCAACTGGTAACGGTCCTTGCTGATATTATTGAAAATCAAACGGATCCTACCATTGCTCCCTACGCTAAAATTG
GAGAAGTAACATTACGACTATCAACAAAAGGGCGAAATCAGAGTGAAGCTTATCAAAAACTGGCTGATTTTGAAAAAAAA
CTTCTAGCGCTTACTACTTTGGATGGCTCCTACCTTAGTGAATTTCTTTATGGCTATGGAGAGGATAATAGTTTGGCAAA
AGAAGTCTTTCAATTATTGAAGAAACACACAAAAACCTTAACGGCAGCAGAAAGTTTAACGGCAGGAATGTTTCAATCTT
CTTTGGCAGACTTTTCAGGTTCTTCAGCAGTTTTTAATGGAGGATTTGTCACATATAGTATAACTGAAAAGTCAAAAATG
TTGGGAATACCTTTAGAGTTGCTCGAGCAGCATGGGGTTGTTAGTGCTTTTACTGCAGAGCAGATGGCCATGAAAGCAAA
AACGCTAACAGACTCGGATATTGCCATTAGTTTAACTGGTGTTGCAGGACCAGATAGTTTGGAGGAACAGCCAGTAGGAA
CAGTTTATATTGGTATTGCTAGTCAAGAAACAGTTGAATCATTTAAGATTTTCATCGGAGGTCGCAGCCGTTCAGATATT
AGGAAAATAGCATGTATGCATGCTTTTAACCTGGTCCGTAAAACTTTATTAAAGGGCGAAAATTTGGTATAA

Domains

Predicted by InterproScan.

• Competence-damaged protein (CinA) (263-416)

• Damage-inducible protein CinA KH domain (CinA_KH) (178-241)

• Probable molybdopterin binding domain (MoCF_biosynth) (5-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus pneumoniae TIGR4	68.182	98.818	0.674
cinA	Streptococcus mutans UA159	67.376	100	0.674
cinA	Streptococcus mitis SK321	67.943	98.818	0.671
cinA	Streptococcus pneumoniae Rx1	67.703	98.818	0.669
cinA	Streptococcus pneumoniae R6	67.703	98.818	0.669
cinA	Streptococcus pneumoniae D39	67.464	98.818	0.667
cinA	Streptococcus mitis NCTC 12261	67.464	98.818	0.667
cinA	Streptococcus suis isolate S10	52.404	98.345	0.515
cinA	Bacillus subtilis subsp. subtilis str. 168	47.847	98.818	0.473