Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SIS06_RS05785 Genome accession   NZ_CP139188
Coordinates   1084320..1085063 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain H17-16     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1079320..1090063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIS06_RS05750 (SIS06_05750) yhaI 1079647..1079988 (+) 342 WP_009966921.1 YhaI family protein -
  SIS06_RS05755 (SIS06_05755) scoC 1079985..1080596 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  SIS06_RS05760 (SIS06_05760) yhaH 1080775..1081131 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  SIS06_RS05765 (SIS06_05765) - 1081261..1081452 (+) 192 WP_003233238.1 hypothetical protein -
  SIS06_RS05770 (SIS06_05770) trpP 1081527..1082045 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  SIS06_RS05775 (SIS06_05775) serC 1082170..1083249 (-) 1080 WP_283934201.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  SIS06_RS05780 (SIS06_05780) hinT 1083396..1083833 (-) 438 WP_080529127.1 HIT family protein -
  SIS06_RS05785 (SIS06_05785) pptA 1084320..1085063 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  SIS06_RS05790 (SIS06_05790) ecsB 1085056..1086282 (+) 1227 WP_049140674.1 ABC transporter permease EcsB -
  SIS06_RS05795 (SIS06_05795) ecsC 1086302..1087012 (+) 711 WP_049140675.1 EcsC family protein -
  SIS06_RS05800 (SIS06_05800) sndC 1087030..1088220 (-) 1191 WP_283934459.1 N-acetyl amino acid acetylase SndC -
  SIS06_RS05805 (SIS06_05805) - 1088292..1089683 (-) 1392 WP_283934202.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=829778 SIS06_RS05785 WP_003233230.1 1084320..1085063(+) (pptA) [Bacillus subtilis strain H17-16]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=829778 SIS06_RS05785 WP_003233230.1 1084320..1085063(+) (pptA) [Bacillus subtilis strain H17-16]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACATATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCAGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCCTTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547