NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	SJH97_RS05710	Genome accession	NZ_CP139175
Coordinates	1221006..1223645 (-)	Length	879 a.a.
NCBI ID	WP_320584339.1	Uniprot ID	-
Organism	Streptomyces sp. CL7
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1216006..1228645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SJH97_RS05670 (SJH97_05670)	-	1216084..1216512 (-)	429	WP_102639454.1	DUF2267 domain-containing protein	-
SJH97_RS05675 (SJH97_05675)	-	1216548..1216940 (-)	393	WP_102639453.1	DUF2267 domain-containing protein	-
SJH97_RS05680 (SJH97_05680)	-	1216980..1217231 (-)	252	WP_233229400.1	hypothetical protein	-
SJH97_RS05685 (SJH97_05685)	-	1217462..1217656 (-)	195	WP_320584336.1	hypothetical protein	-
SJH97_RS05690 (SJH97_05690)	-	1217956..1218453 (-)	498	WP_181383153.1	Hsp20/alpha crystallin family protein	-
SJH97_RS05695 (SJH97_05695)	-	1218500..1220281 (-)	1782	WP_320584337.1	FAD-dependent oxidoreductase	-
SJH97_RS05700 (SJH97_05700)	-	1220281..1220544 (-)	264	WP_102639448.1	UBP-type zinc finger domain-containing protein	-
SJH97_RS05705 (SJH97_05705)	trxA	1220551..1221009 (-)	459	WP_320584338.1	thioredoxin	-
SJH97_RS05710 (SJH97_05710)	clpC	1221006..1223645 (-)	2640	WP_320584339.1	ATP-dependent chaperone ClpB	Regulator
SJH97_RS05715 (SJH97_05715)	-	1223636..1224043 (-)	408	WP_320584340.1	chaperone modulator CbpM	-
SJH97_RS05720 (SJH97_05720)	-	1224040..1225002 (-)	963	WP_320584341.1	J domain-containing protein	-
SJH97_RS05725 (SJH97_05725)	-	1225009..1225626 (-)	618	WP_156699056.1	nucleotide exchange factor GrpE	-
SJH97_RS05730 (SJH97_05730)	dnaK	1225636..1227534 (-)	1899	WP_102639461.1	molecular chaperone DnaK	-
SJH97_RS05735 (SJH97_05735)	-	1227586..1228074 (-)	489	WP_086702085.1	general stress protein	-

Sequence

Protein

Download Length: 879 a.a. Molecular weight: 98114.27 Da Isoelectric Point: 5.0285

                                >NTDB_id=829515 SJH97_RS05710 WP_320584339.1 1221006..1223645(-) (clpC) [Streptomyces sp. CL7]

MDMNRLTQKSQEALQEAQTAAVGMGQTEVDGEHLLLALLDQEDGLIPRLLQGAGRDPRELRAAVREELSRRPKVTGPGAA

PGQVFVTQRLSRLLDGAEREAKRLKDEYVSVEHLLLALAEEGSATAAGRLLKEHGITRDSFLSALTQIRGNQRVTSANPE

VAYEALEKYGRDLVAEARDGKLDPVIGRDSEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDK

TVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMIGATT

LDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILRGLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVD

EACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKETDPASKTRLEELRKELADLRGEADAKHAQWEAERQAIRRVQEL

RQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLAAKQGENRLLREVVTEEEIAEIVAAWTGIPVARLQ

EGEREKLLRLDEILRERVIGQDEAVKLVADAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEENMVRL

DMSEYQERHTVSRLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNT

VIIMTSNIGSEHLLDGVTAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKPLGEQQIERIVELQFDELRSRLAERR

ITVELTQAAREFIAHQGYDPVYGARPLRRYISHEVETLVGRALLSGDVQDGATVRVDADNGELVVTYGRPEDVKGVRAA

Nucleotide

Download Length: 2640 bp

                                >NTDB_id=829515 SJH97_RS05710 WP_320584339.1 1221006..1223645(-) (clpC) [Streptomyces sp. CL7]

ATGGACATGAACCGTCTCACCCAGAAGTCACAGGAAGCCCTCCAGGAGGCGCAGACCGCTGCCGTCGGCATGGGTCAGAC

CGAGGTCGACGGTGAGCATCTGCTGCTCGCGCTCCTCGACCAGGAGGACGGTCTGATCCCGCGGTTGCTGCAAGGGGCGG

GCAGGGATCCCCGGGAACTCCGTGCGGCGGTGCGTGAGGAGCTTTCCCGCCGGCCGAAGGTGACCGGTCCGGGTGCGGCG

CCGGGGCAGGTGTTCGTCACCCAGCGCCTGTCCCGGCTGCTGGACGGGGCCGAGCGGGAGGCCAAACGCCTCAAGGACGA

GTACGTCTCCGTGGAGCACCTCCTGCTGGCCCTGGCCGAGGAGGGCTCGGCGACCGCCGCCGGGCGCCTGCTCAAGGAGC

ACGGCATCACCCGGGACTCGTTCTTGAGCGCGCTGACCCAGATCCGCGGCAACCAGCGGGTCACCTCCGCCAACCCCGAA

GTGGCCTACGAGGCTCTGGAGAAGTACGGCCGCGACCTGGTCGCCGAGGCCAGGGACGGCAAGCTCGACCCCGTCATCGG

CCGGGACTCCGAAATCCGCCGCGTCACCCAGATCCTCAGCCGGAAGACCAAGAACAACCCCGTCCTCATCGGCGACCCCG

GCGTCGGCAAGACCGCCATCGTCGAGGGTCTGGCCCAGCGCATCGTCCGCGGCGACGTGCCCGAAGGACTCCGCGACAAG

ACCGTGTTCGCTCTCGACATGGGCTCCCTGGTGGCCGGAGCCAAGTACCGGGGCGAGTTCGAGGAACGCCTCAAGGCCGT

GCTGTCCGAGGTGAAGGCGGCCCAGGGGCGCATTCTGCTCTTCGTCGACGAACTCCACACCGTCGTCGGCGCGGGCGCCG

CCGAAGGGGCCATGGACGCGGGCAACATGCTCAAGCCGATGCTCGCCCGCGGCGAACTCCACATGATCGGCGCCACCACC

CTCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCCCTCGAACGCCGCTTCCAGCAGGTCCTGGTCGACGAGCCGAG

CGTGGAGGACACCATCTCCATCCTGCGCGGACTGCGTGAACGCCTGGAGGTCTTCCACGGCGTGAAGATCCAGGACACGG

CGCTGGTCTCCGCGGCCACCCTCTCCCACCGCTACATCACCGACCGGTTCCTGCCCGACAAGGCCATCGACCTCGTCGAC

GAAGCCTGCGCCCGGCTGCGTACCGAGATCGACTCGATGCCCGCCGAACTCGACGAGATCACCCGCCGCGTCACCCGCCT

GGAGATCGAGGAGGCTGCCCTCTCCAAGGAGACCGACCCCGCGAGCAAGACCCGCCTGGAGGAACTGCGCAAGGAACTCG

CCGACTTGCGCGGCGAGGCCGACGCCAAACACGCGCAGTGGGAGGCCGAACGGCAGGCGATCCGCCGCGTGCAGGAACTG

CGCCAGGAACTGGAACAGGTCCGCCACGAGGCGGAGGAGGCCGAACGGGCCTACGACCTCAACCGCGCCGCCGAACTCCG

TTACGGCCGCCTCCAGGACCTGGAGCGCCGGCTCGCCGCGGAGGAGGAACAACTGGCCGCGAAGCAAGGGGAGAACCGGC

TGCTGCGCGAGGTCGTCACCGAGGAGGAGATCGCCGAGATCGTCGCCGCCTGGACCGGCATACCCGTCGCCCGTCTCCAG

GAGGGCGAACGCGAAAAGCTGCTGCGCCTCGACGAGATCCTGCGCGAGCGCGTCATCGGCCAGGACGAGGCTGTCAAGCT

TGTCGCCGACGCCATCATCCGCGCTCGCTCCGGCATCCGCGACCCTCGCCGCCCCATCGGCTCGTTCATCTTCCTCGGCC

CGACCGGCGTCGGGAAGACCGAGCTGGCCAAGACCCTCGCCCGGGCCCTGTTCGACTCCGAGGAGAACATGGTCCGCCTC

GACATGAGCGAGTACCAGGAGCGGCACACCGTCAGCCGGCTCATGGGCGCACCGCCCGGCTACGTCGGCTACGAGGAAGG

CGGACAGCTGACCGAGGCCGTACGCCGCAAGCCGTACTCGGTCGTGCTGTTCGACGAGGTCGAGAAGGCGCACACCGACG

TCTTCAACACCCTGCTGCAGATCCTCGACGACGGCCGCATCACCGACGCCCAGGGCCGCACCGTCGACTTCCGCAACACC

GTGATCATCATGACCTCCAACATCGGCTCCGAGCACCTCCTCGACGGCGTCACCGCCGAGGGGGAGATCAAACCGGACGC

ACGCGCCCTGGTGATGGGCGAGCTGCGCGGGCACTTCCGCCCGGAGTTCCTCAACCGCGTCGACGACATCGTGCTGTTCA

AGCCACTCGGTGAGCAGCAGATCGAGCGAATCGTGGAGCTGCAGTTCGACGAACTGCGAAGCCGTCTCGCCGAGCGCCGC

ATCACCGTGGAACTCACCCAAGCAGCCCGGGAGTTCATCGCCCACCAGGGTTACGACCCGGTGTACGGGGCCCGGCCGCT

GCGGCGCTACATCTCCCACGAGGTCGAGACGCTGGTCGGCCGCGCCCTGCTGAGCGGCGACGTACAGGACGGCGCGACGG

TCCGCGTCGACGCCGACAACGGAGAGCTGGTCGTCACCTACGGCCGGCCCGAGGACGTGAAGGGAGTGAGGGCGGCATGA