Detailed information NTG0829491

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: SKB18_RS07175
• Genome accession: NZ_CP139163
• Coordinates: 1469559..1472384 (+)
• Length: 941 a.a.
• NCBI ID: WP_012027732.1
• Uniprot ID: -
• Organism: Streptococcus suis strain cnzyss2-311
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1464559..1477384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SKB18_RS07145	-	1464579..1465741 (-)	1163	Protein_1361	IS30 family transposase	-
SKB18_RS07150	rpsF	1465981..1466271 (+)	291	WP_002942403.1	30S ribosomal protein S6	-
SKB18_RS07155	ssbA	1466283..1466777 (+)	495	WP_002942409.1	single-stranded DNA-binding protein	Machinery gene
SKB18_RS07160	rpsR	1466810..1467049 (+)	240	WP_002939250.1	30S ribosomal protein S18	-
SKB18_RS07165	-	1467439..1468095 (-)	657	WP_012027735.1	DUF1129 domain-containing protein	-
SKB18_RS07170	-	1468111..1469055 (-)	945	WP_002939248.1	magnesium transporter CorA family protein	-
SKB18_RS07175	uvrA	1469559..1472384 (+)	2826	WP_012027732.1	excinuclease ABC subunit UvrA	Machinery gene
SKB18_RS07180	-	1472483..1473544 (+)	1062	WP_012775324.1	Xaa-Pro peptidase family protein	-
SKB18_RS07185	efp	1473608..1474165 (+)	558	WP_012775323.1	elongation factor P	-
SKB18_RS07190	-	1474193..1474585 (+)	393	WP_002942446.1	Asp23/Gls24 family envelope stress response protein	-
SKB18_RS07195	nusB	1474575..1474994 (+)	420	WP_002938276.1	transcription antitermination factor NusB	-
SKB18_RS07200	-	1475074..1476039 (-)	966	WP_012027724.1	LacI family DNA-binding transcriptional regulator	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103887.11 Da
• Isoelectric Point: 6.1800

>NTDB_id=829491 SKB18_RS07175 WP_012027732.1 1469559..1472384(+) (uvrA) [Streptococcus suis strain cnzyss2-311]
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGL
SPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPYCINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKK
GQHKTIFEKIQKDGYVRVRVNGGVYDVSEVPELSKSKAHNIEVVVDRIVIKDGIRSRLFDSIEAALRIADGYVIIDTMDE
KEMLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDTDLIVPDASKTLREGALAPWNPISSNYYPQML
EQAMNHFGVDMDKPFEELTEEEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYM
NELTCGTCHGYRLNDQALSVKVGGEQGLHIGQLSDLSVADHLQVIEHLTLSENEATIATPIVKEIKDRLSFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVD
DGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGTVVATGTPEEVAENPASFTGQYLKMKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=829491 SKB18_RS07175 WP_012027732.1 1469559..1472384(+) (uvrA) [Streptococcus suis strain cnzyss2-311]
ATGCAAGAAAATATTGTGATTCATGGGGCGCGTGCCCATAATTTGAAAAATATTGATGTGACCATTCCGCGTGAGAAGCT
GGTGGTGGTGACTGGTTTGTCGGGGTCTGGTAAGTCGAGTTTGGCTTTCGATACCTTGTATGCCGAGGGTCAACGTCGCT
ATGTGGAGTCTTTGTCTGCCTATGCTCGTCAGTTCTTGGGCAACATGGACAAGCCTGATGTGGATTCCATAGAGGGTCTC
AGCCCTGCTATTTCCATTGACCAAAAAACCACATCGCGGAATCCGCGTTCGACAGTCGGTACAGCGACGGAAATCAATGA
CTATCTCCGCTTGCTTTATGCTCGGGTTGGGGTACCTTACTGTATCAATGGCCACGGAGCGATTGCGGCTTCTTCGGTGG
AACAAATCGTTGATGAGGTCTTGGAATTGCCAGAACGCCAACGTTTGCAGATTCTAGCTCCGATTGTTCGTAAGAAAAAG
GGGCAACACAAGACCATTTTTGAGAAAATCCAGAAGGACGGCTATGTTCGGGTACGTGTCAATGGCGGTGTCTATGATGT
GTCGGAAGTACCAGAATTGTCCAAGAGCAAGGCTCATAATATTGAAGTTGTGGTCGATCGGATTGTGATCAAAGATGGCA
TTCGCTCGCGGCTTTTTGACTCCATTGAGGCGGCCCTGCGGATTGCGGACGGCTATGTCATCATCGACACCATGGATGAG
AAGGAAATGCTTTTCTCTGAGTACTATGCCTGCCCAGTTTGTGGTTTTACGGTACCAGAGTTGGAGCCTCGCCTCTTCTC
TTTCAATGCTCCTTTTGGGTCTTGTAGCGACTGTGACGGTTTGGGCATGAAGCTGGAAGTGGATACGGATTTGATTGTCC
CAGATGCCAGCAAGACCTTGCGTGAAGGTGCCTTGGCTCCTTGGAATCCAATCTCATCCAACTACTATCCTCAGATGTTG
GAGCAGGCCATGAATCACTTTGGTGTGGACATGGACAAGCCTTTTGAGGAATTGACGGAAGAGGAGAAGAACCTGATTTT
CAACGGTTCTGACGGGAAAGAATTCCATTTCCATTATGAAAATGAGTTCGGTGGAGTCCGAGATATTGACATTCCATTCG
AGGGCTTGATTACCAACATTAATCGCCGCTATCGTGAAACCAATAGTGATTACACACGGACAGTCATGAAGACTTACATG
AATGAACTGACCTGTGGGACCTGCCACGGCTATCGCCTCAATGACCAAGCCCTGTCTGTCAAAGTCGGAGGCGAGCAGGG
ACTTCATATCGGACAATTATCAGACTTGTCCGTGGCGGATCATTTGCAAGTCATTGAACATCTGACCTTGTCTGAAAATG
AAGCCACCATTGCAACACCCATTGTCAAGGAAATCAAGGATCGCCTGTCCTTCCTAAATAACGTTGGTCTCAACTATCTG
ACTCTTTCACGAGCAGCAGGTACCCTTTCTGGTGGTGAGAGCCAGCGGATTCGTCTGGCGACTCAGATTGGCTCTAACCT
GTCTGGTGTCCTCTATATTCTGGATGAGCCGTCGATTGGTCTGCACCAGCGGGACAATGACCGTCTGATTGCTAGTCTTA
AGAAAATGCGTGATTTGGGCAATACATTGATTGTGGTGGAGCATGATGAGGACACTATGCGTGAGGCGGACTGGTTGATT
GACATCGGTCCAGGTGCGGGTGTGTTTGGCGGAGAAATCGTGGCCTCTGGCACACCAGCCCAAGTAGCTAAAAACAAGAA
ATCCATTACAGGCCAGTACCTGTCTGGCAAACGTGAAATTCCAGTTCCTTTGGAACGTCGTGTTGGAAATGGTCGATTCT
TAGAGGTGACCGGTGCCAAGGAAAACAACCTGCAAGATGTGACTGTTCGTTTCCCACTCGGAAAATTTGTAGCGGTGACA
GGGGTGTCTGGCTCAGGTAAGTCAACTCTGGTCAATTCCATTCTGAAAAAAGCTATTGCTCAGAAACTCAATCGCAATTC
GGACAAGCCAGGTAAGTTCAAGTCTATTTCAGGAATTGAACACTTGGACCGCCTGATTGATATTGACCAAAGCCCGATTG
GACGGACACCACGTTCTAACCCAGCTACCTACACAGGTGTCTTTGACGATATTCGGGATTTGTTTGCCCAGACCAATGAA
GCCAAGATTCGTGGCTACAAGAAGGGCCGTTTCTCCTTTAACGTCAAAGGTGGACGGTGTGAGGCTTGTTCTGGTGATGG
GATTATCAAGATTGAAATGCACTTCCTGCCCGATGTCTTTGTACCTTGTGAAGTCTGTCATGGACACCGCTATAATTCTG
AAACCTTGGAAGTACACTACAAGGAGAAAAATATCGCTCAGGTCCTTGATATGACGGTCAATGACGCGGTCGAGTTCTTC
AAGCATATTCCAAAAATTGAGCGGAAACTTCGTACTATTCAAGATGTAGGTTTGGGCTACGTTACTCTAGGTCAGCCAGC
AACGACCCTATCAGGTGGGGAAGCCCAGCGTATGAAGTTGGCTTCTGAACTCCACAAGCGGTCAACTGGTAAATCCTTGT
ATATCTTGGATGAGCCGACGACAGGTCTGCATACGGAGGACATTGCCCAGTTGCTCAAGGTCTTGGCTCGCTTTGTTGAT
GATGGCAATACCGTGCTGGTCATCGAGCACAATCTGGATGTTATCAAGACAGCCGACCACATTATCGACATGGGACCGGA
AGGCGGTGTCGGTGGCGGTACCGTTGTCGCGACAGGAACACCAGAAGAAGTGGCGGAGAACCCAGCCAGCTTTACAGGCC
AGTATCTGAAAATGAAGTTGAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-238)

• ABC transporter (ABC_tran) (624-860)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	89.149	99.894	0.891
uvrA	Streptococcus pneumoniae TIGR4	89.149	99.894	0.891
uvrA	Streptococcus pneumoniae D39	89.149	99.894	0.891