Detailed information NTG0829092

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: SID94_RS00820
• Genome accession: NZ_CP139039
• Coordinates: 174858..175841 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli MP1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 169858..180841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SID94_RS00805 (SID94_00805)	dppA	171002..172609 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
SID94_RS00810 (SID94_00810)	dppB	172916..173935 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
SID94_RS00815 (SID94_00815)	dppC	173945..174847 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
SID94_RS00820 (SID94_00820)	amiE	174858..175841 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
SID94_RS00825 (SID94_00825)	dppF	175838..176842 (+)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
SID94_RS00830 (SID94_00830)	yhjV	176872..178143 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
SID94_RS00835 (SID94_00835)	-	178619..178726 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SID94_RS00840 (SID94_00840)	-	179102..179209 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
SID94_RS00845 (SID94_00845)	-	179585..179692 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=829092 SID94_RS00820 WP_001196477.1 174858..175841(+) (amiE) [Escherichia coli MP1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=829092 SID94_RS00820 WP_001196477.1 174858..175841(+) (amiE) [Escherichia coli MP1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404