Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   H7677_RS08430 Genome accession   NZ_AP023391
Coordinates   1723041..1723775 (-) Length   244 a.a.
NCBI ID   WP_002939204.1    Uniprot ID   A0A0K2E869
Organism   Streptococcus suis strain DAT299     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1718041..1728775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7677_RS08400 (DAT299_16190) rnpM 1718268..1718564 (-) 297 WP_002942375.1 RNase P modulator RnpM -
  H7677_RS08405 (DAT299_16200) nusA 1718581..1719723 (-) 1143 WP_004194726.1 transcription termination factor NusA -
  H7677_RS08410 (DAT299_16210) rimP 1719797..1720267 (-) 471 WP_184493402.1 ribosome maturation factor RimP -
  H7677_RS08415 (DAT299_16220) trmB 1720525..1721163 (-) 639 WP_044770515.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7677_RS08420 (DAT299_16230) ccrZ 1721160..1721954 (-) 795 WP_002942360.1 cell cycle regulator CcrZ -
  H7677_RS08425 (DAT299_16240) - 1722004..1723044 (-) 1041 WP_172013308.1 ABC transporter permease -
  H7677_RS08430 (DAT299_16250) pptA 1723041..1723775 (-) 735 WP_002939204.1 ABC transporter ATP-binding protein Regulator
  H7677_RS08435 (DAT299_16260) - 1723838..1724251 (+) 414 WP_172013309.1 HIT family protein -
  H7677_RS08440 (DAT299_16270) - 1724253..1724555 (+) 303 WP_024395377.1 hypothetical protein -
  H7677_RS08445 (DAT299_16280) - 1724821..1726014 (-) 1194 WP_002939198.1 LCP family protein -
  H7677_RS08450 (DAT299_16290) - 1726011..1726538 (-) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  H7677_RS08455 (DAT299_16300) tsaE 1726531..1726971 (-) 441 WP_079397089.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H7677_RS08460 (DAT299_16310) - 1727072..1728736 (-) 1665 WP_184493404.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26760.04 Da        Isoelectric Point: 4.3999

>NTDB_id=82909 H7677_RS08430 WP_002939204.1 1723041..1723775(-) (pptA) [Streptococcus suis strain DAT299]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLGEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=82909 H7677_RS08430 WP_002939204.1 1723041..1723775(-) (pptA) [Streptococcus suis strain DAT299]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGGCAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGGGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K2E869

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721

Multiple sequence alignment