Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   QLQ45_RS04190 Genome accession   NZ_CP124891
Coordinates   845955..847628 (+) Length   557 a.a.
NCBI ID   WP_002383398.1    Uniprot ID   A0A2S7LWP6
Organism   Enterococcus faecalis strain EfsC130     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 840955..852628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ45_RS04160 (QLQ45_04160) - 841206..842051 (+) 846 WP_002355876.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  QLQ45_RS04165 (QLQ45_04165) xseA 842061..843407 (+) 1347 WP_002355877.1 exodeoxyribonuclease VII large subunit -
  QLQ45_RS04170 (QLQ45_04170) - 843409..843639 (+) 231 WP_002383396.1 exodeoxyribonuclease VII small subunit -
  QLQ45_RS04175 (QLQ45_04175) - 843639..844520 (+) 882 WP_002355879.1 polyprenyl synthetase family protein -
  QLQ45_RS04180 (QLQ45_04180) - 844534..845349 (+) 816 WP_002383397.1 TlyA family RNA methyltransferase -
  QLQ45_RS04185 (QLQ45_04185) - 845488..845937 (+) 450 WP_002358881.1 ArgR family transcriptional regulator -
  QLQ45_RS04190 (QLQ45_04190) recN 845955..847628 (+) 1674 WP_002383398.1 DNA repair protein RecN Machinery gene
  QLQ45_RS04195 (QLQ45_04195) - 847719..847829 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  QLQ45_RS04200 (QLQ45_04200) - 847897..848862 (-) 966 WP_002383400.1 magnesium transporter CorA family protein -
  QLQ45_RS04205 (QLQ45_04205) - 849107..849499 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  QLQ45_RS04210 (QLQ45_04210) mraZ 849733..850218 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  QLQ45_RS04215 (QLQ45_04215) rsmH 850233..851189 (+) 957 WP_010710705.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  QLQ45_RS04220 (QLQ45_04220) ftsL 851206..851613 (+) 408 WP_002358883.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62727.18 Da        Isoelectric Point: 4.5772

>NTDB_id=828860 QLQ45_RS04190 WP_002383398.1 845955..847628(+) (recN) [Enterococcus faecalis strain EfsC130]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLTVKE
KYTRAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALVLRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=828860 QLQ45_RS04190 WP_002383398.1 845955..847628(+) (recN) [Enterococcus faecalis strain EfsC130]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACTTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGAATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAACAGTCAAAGAA
AAATATACACGGGCATATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGC
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGCTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATACAAAAC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGTCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGCGATTCA
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCGGCTCATCAACAAGCGTTAGTTTTACGAAAAGAGCGAAAGCGCCTAG
CCAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACGGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGAGTAGCACAGGCGATTGCCGATAAAATTTATCAG
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCCCAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATCGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S7LWP6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501