Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   QLQ38_RS03735 Genome accession   NZ_CP124890
Coordinates   771963..773636 (+) Length   557 a.a.
NCBI ID   WP_010823474.1    Uniprot ID   -
Organism   Enterococcus faecalis strain EfsPF2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 766963..778636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ38_RS03705 (QLQ38_03705) - 767214..768059 (+) 846 WP_048949282.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  QLQ38_RS03710 (QLQ38_03710) xseA 768069..769415 (+) 1347 WP_048949281.1 exodeoxyribonuclease VII large subunit -
  QLQ38_RS03715 (QLQ38_03715) - 769417..769647 (+) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  QLQ38_RS03720 (QLQ38_03720) - 769647..770528 (+) 882 WP_002355879.1 polyprenyl synthetase family protein -
  QLQ38_RS03725 (QLQ38_03725) - 770542..771357 (+) 816 WP_048949280.1 TlyA family RNA methyltransferase -
  QLQ38_RS03730 (QLQ38_03730) - 771496..771945 (+) 450 WP_002355883.1 ArgR family transcriptional regulator -
  QLQ38_RS03735 (QLQ38_03735) recN 771963..773636 (+) 1674 WP_010823474.1 DNA repair protein RecN Machinery gene
  QLQ38_RS03740 (QLQ38_03740) - 773728..773838 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  QLQ38_RS03745 (QLQ38_03745) - 773906..774871 (-) 966 WP_002383400.1 magnesium transporter CorA family protein -
  QLQ38_RS03750 (QLQ38_03750) - 775116..775508 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  QLQ38_RS03755 (QLQ38_03755) mraZ 775742..776227 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  QLQ38_RS03760 (QLQ38_03760) rsmH 776242..777198 (+) 957 WP_002355891.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  QLQ38_RS03765 (QLQ38_03765) ftsL 777215..777622 (+) 408 WP_002358883.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62641.04 Da        Isoelectric Point: 4.5521

>NTDB_id=828822 QLQ38_RS03735 WP_010823474.1 771963..773636(+) (recN) [Enterococcus faecalis strain EfsPF2]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=828822 QLQ38_RS03735 WP_010823474.1 771963..773636(+) (recN) [Enterococcus faecalis strain EfsPF2]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAATGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCATATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAAAC
ATTGTCAGATACTGTTCAAAATGCCTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGTCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCCGCTCATCAACAAGCATTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTTGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACTGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGATGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TTACTAGTATTGTTTTTGATGAAGTAGATACAGGAGTCAGTGGCCGAGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCTGATGAACATTATTTTATTGA
AAAAGAAATCGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501