Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SGQ79_RS09600 Genome accession   NZ_CP138889
Coordinates   1959895..1960713 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain 1221     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1954895..1965713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGQ79_RS09580 (SGQ79_09575) - 1955988..1956965 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  SGQ79_RS09585 (SGQ79_09580) - 1957226..1958062 (-) 837 WP_000886466.1 membrane protein -
  SGQ79_RS09590 (SGQ79_09585) - 1958071..1959588 (-) 1518 WP_000535828.1 ABC transporter ATP-binding protein -
  SGQ79_RS09595 (SGQ79_09590) - 1959603..1959917 (-) 315 WP_000435806.1 YfhH family protein -
  SGQ79_RS09600 (SGQ79_09595) recX 1959895..1960713 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  SGQ79_RS09605 (SGQ79_09600) sgtB 1960974..1961783 (-) 810 WP_353059350.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  SGQ79_RS09610 (SGQ79_09605) - 1962124..1962639 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  SGQ79_RS09615 (SGQ79_09610) - 1962770..1962931 (-) 162 WP_001005407.1 SE1561 family protein -
  SGQ79_RS09620 (SGQ79_09615) - 1963278..1963358 (+) 81 WP_100250272.1 hypothetical protein -
  SGQ79_RS09625 (SGQ79_09620) - 1963471..1964085 (-) 615 WP_000051376.1 hypothetical protein -
  SGQ79_RS09630 (SGQ79_09625) - 1964082..1964258 (-) 177 WP_000201922.1 hypothetical protein -
  SGQ79_RS09635 (SGQ79_09630) - 1964723..1965478 (-) 756 WP_000861038.1 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=828794 SGQ79_RS09600 WP_001124422.1 1959895..1960713(-) (recX) [Staphylococcus aureus strain 1221]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=828794 SGQ79_RS09600 WP_001124422.1 1959895..1960713(-) (recX) [Staphylococcus aureus strain 1221]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996