Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   SGQ79_RS06350 Genome accession   NZ_CP138889
Coordinates   1326807..1327430 (-) Length   207 a.a.
NCBI ID   WP_001208757.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 1221     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1321807..1332430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGQ79_RS06330 (SGQ79_06325) rpmG 1323384..1323533 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  SGQ79_RS06335 (SGQ79_06330) rpsN 1323987..1324256 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  SGQ79_RS06340 (SGQ79_06335) guaC 1324413..1325390 (+) 978 WP_000688123.1 GMP reductase -
  SGQ79_RS06345 (SGQ79_06340) - 1325412..1326428 (+) 1017 WP_169274603.1 CAP domain-containing protein -
  SGQ79_RS06350 (SGQ79_06345) dinR/lexA 1326807..1327430 (-) 624 WP_001208757.1 transcriptional repressor LexA Regulator
  SGQ79_RS06355 (SGQ79_06350) sosA 1327573..1327806 (+) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  SGQ79_RS06360 (SGQ79_06355) - 1327942..1328181 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  SGQ79_RS06365 (SGQ79_06360) recP/tkt 1328302..1330290 (+) 1989 WP_000481444.1 transketolase Machinery gene
  SGQ79_RS06370 (SGQ79_06365) - 1330568..1330810 (+) 243 WP_000246909.1 YneF family protein -
  SGQ79_RS06375 (SGQ79_06370) - 1330797..1330895 (+) 99 WP_001789897.1 hypothetical protein -
  SGQ79_RS06380 (SGQ79_06375) - 1330989..1331456 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23304.52 Da        Isoelectric Point: 4.8811

>NTDB_id=828764 SGQ79_RS06350 WP_001208757.1 1326807..1327430(-) (dinR/lexA) [Staphylococcus aureus strain 1221]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTSDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=828764 SGQ79_RS06350 WP_001208757.1 1326807..1327430(-) (dinR/lexA) [Staphylococcus aureus strain 1221]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAGTGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACC
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(86-201)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657