Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   QLQ46_RS10580 Genome accession   NZ_CP124887
Coordinates   2203850..2205523 (-) Length   557 a.a.
NCBI ID   WP_002397924.1    Uniprot ID   A0A449FZN5
Organism   Enterococcus faecalis strain EfsPNK7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2198850..2210523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ46_RS10550 (QLQ46_10550) ftsL 2199865..2200272 (-) 408 WP_002385090.1 cell division protein FtsL -
  QLQ46_RS10555 (QLQ46_10555) rsmH 2200289..2201245 (-) 957 WP_002355891.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  QLQ46_RS10560 (QLQ46_10560) mraZ 2201260..2201745 (-) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  QLQ46_RS10565 (QLQ46_10565) - 2201979..2202371 (-) 393 WP_002383401.1 DUF3397 domain-containing protein -
  QLQ46_RS10570 (QLQ46_10570) - 2202616..2203581 (+) 966 WP_002383400.1 magnesium transporter CorA family protein -
  QLQ46_RS10575 (QLQ46_10575) - 2203649..2203759 (+) 111 WP_002383399.1 DUF4044 domain-containing protein -
  QLQ46_RS10580 (QLQ46_10580) recN 2203850..2205523 (-) 1674 WP_002397924.1 DNA repair protein RecN Machinery gene
  QLQ46_RS10585 (QLQ46_10585) - 2205541..2205990 (-) 450 WP_002358881.1 ArgR family transcriptional regulator -
  QLQ46_RS10590 (QLQ46_10590) - 2206129..2206944 (-) 816 WP_002364633.1 TlyA family rRNA (cytidine-2'-O)-methyltransferase -
  QLQ46_RS10595 (QLQ46_10595) - 2206958..2207839 (-) 882 WP_002355879.1 polyprenyl synthetase family protein -
  QLQ46_RS10600 (QLQ46_10600) - 2207839..2208069 (-) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  QLQ46_RS10605 (QLQ46_10605) xseA 2208071..2209417 (-) 1347 WP_010713810.1 exodeoxyribonuclease VII large subunit -
  QLQ46_RS10610 (QLQ46_10610) - 2209427..2210272 (-) 846 WP_002355876.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62631.00 Da        Isoelectric Point: 4.5521

>NTDB_id=828760 QLQ46_RS10580 WP_002397924.1 2203850..2205523(-) (recN) [Enterococcus faecalis strain EfsPNK7]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDSEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=828760 QLQ46_RS10580 WP_002397924.1 2203850..2205523(-) (recN) [Enterococcus faecalis strain EfsPNK7]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACTGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGAATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTGGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTGGCTGGCGAAGAAGAACAATTGC
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCACTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATTCAGAATATAAAAC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCCAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATTACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGCGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCGGCTCATCAACAAGCGTTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CAAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTGTATTTGGAGCGAACGGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTAGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGTGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A449FZN5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501