Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QJS65_RS07025 Genome accession   NZ_CP124831
Coordinates   1378393..1378974 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain Sample7_7     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1373393..1383974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJS65_RS07000 (QJS65_07000) - 1374057..1375235 (+) 1179 WP_282747030.1 N-acetyldiaminopimelate deacetylase -
  QJS65_RS07005 (QJS65_07005) - 1375286..1375528 (+) 243 WP_003211408.1 YkuS family protein -
  QJS65_RS07010 (QJS65_07010) - 1375553..1376362 (-) 810 WP_282747032.1 mechanosensitive ion channel family protein -
  QJS65_RS07015 (QJS65_07015) ahpA 1376634..1377176 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  QJS65_RS07020 (QJS65_07020) - 1377453..1377911 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  QJS65_RS07025 (QJS65_07025) rok 1378393..1378974 (+) 582 WP_007498648.1 hypothetical protein Regulator
  QJS65_RS07030 (QJS65_07030) - 1379037..1379954 (-) 918 WP_144678863.1 sigmaE regulated sporulation protein -
  QJS65_RS07035 (QJS65_07035) - 1380038..1380619 (+) 582 WP_282747035.1 molybdenum cofactor guanylyltransferase -
  QJS65_RS07040 (QJS65_07040) - 1380649..1381665 (+) 1017 WP_282747037.1 thiazole biosynthesis adenylyltransferase ThiF -
  QJS65_RS07045 (QJS65_07045) glp 1381675..1382949 (+) 1275 WP_186365888.1 gephyrin-like molybdotransferase Glp -
  QJS65_RS07050 (QJS65_07050) mobB 1382931..1383458 (+) 528 WP_041507370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QJS65_RS07055 (QJS65_07055) - 1383451..1383942 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=828207 QJS65_RS07025 WP_007498648.1 1378393..1378974(+) (rok) [Bacillus altitudinis strain Sample7_7]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=828207 QJS65_RS07025 WP_007498648.1 1378393..1378974(+) (rok) [Bacillus altitudinis strain Sample7_7]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCAATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782