Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QJS65_RS05340 Genome accession   NZ_CP124831
Coordinates   1057647..1058597 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain Sample7_7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1052647..1063597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJS65_RS05320 (QJS65_05320) - 1053881..1054363 (+) 483 WP_008348662.1 hypothetical protein -
  QJS65_RS05325 (QJS65_05325) - 1054394..1055833 (-) 1440 WP_282746826.1 PLP-dependent aminotransferase family protein -
  QJS65_RS05330 (QJS65_05330) - 1055977..1057146 (+) 1170 WP_282746828.1 MFS transporter -
  QJS65_RS05335 (QJS65_05335) - 1057209..1057487 (+) 279 WP_073415938.1 barstar family protein -
  QJS65_RS05340 (QJS65_05340) ceuB 1057647..1058597 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  QJS65_RS05345 (QJS65_05345) - 1058590..1059540 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  QJS65_RS05350 (QJS65_05350) - 1059531..1060289 (+) 759 WP_282746831.1 ATP-binding cassette domain-containing protein -
  QJS65_RS05355 (QJS65_05355) - 1060312..1061256 (+) 945 WP_138278364.1 siderophore ABC transporter substrate-binding protein -
  QJS65_RS05360 (QJS65_05360) - 1061594..1062550 (+) 957 WP_007499147.1 LCP family protein -
  QJS65_RS05365 (QJS65_05365) - 1062783..1063217 (-) 435 WP_268416794.1 enoyl-CoA hydratase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=828194 QJS65_RS05340 WP_039167438.1 1057647..1058597(+) (ceuB) [Bacillus altitudinis strain Sample7_7]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=828194 QJS65_RS05340 WP_039167438.1 1057647..1058597(+) (ceuB) [Bacillus altitudinis strain Sample7_7]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGTGATCACTTGAAAAAAAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTTG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494