Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   QJS65_RS05310 Genome accession   NZ_CP124831
Coordinates   1051666..1052244 (+) Length   192 a.a.
NCBI ID   WP_017366958.1    Uniprot ID   A0A5D4P9G2
Organism   Bacillus altitudinis strain Sample7_7     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1046666..1057244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJS65_RS05290 (QJS65_05290) - 1047159..1048454 (-) 1296 WP_007497200.1 globin-coupled sensor protein -
  QJS65_RS05295 (QJS65_05295) - 1048546..1050078 (-) 1533 WP_282746822.1 FAD-dependent oxidoreductase -
  QJS65_RS05300 (QJS65_05300) - 1050221..1051081 (+) 861 WP_058337510.1 SDR family oxidoreductase -
  QJS65_RS05305 (QJS65_05305) - 1051146..1051376 (-) 231 WP_003210924.1 IDEAL domain-containing protein -
  QJS65_RS05310 (QJS65_05310) comK 1051666..1052244 (+) 579 WP_017366958.1 competence protein ComK Regulator
  QJS65_RS05315 (QJS65_05315) - 1052388..1053494 (+) 1107 WP_282746825.1 alanine racemase -
  QJS65_RS05320 (QJS65_05320) - 1053881..1054363 (+) 483 WP_008348662.1 hypothetical protein -
  QJS65_RS05325 (QJS65_05325) - 1054394..1055833 (-) 1440 WP_282746826.1 PLP-dependent aminotransferase family protein -
  QJS65_RS05330 (QJS65_05330) - 1055977..1057146 (+) 1170 WP_282746828.1 MFS transporter -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22348.40 Da        Isoelectric Point: 8.7996

>NTDB_id=828193 QJS65_RS05310 WP_017366958.1 1051666..1052244(+) (comK) [Bacillus altitudinis strain Sample7_7]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=828193 QJS65_RS05310 WP_017366958.1 1051666..1052244(+) (comK) [Bacillus altitudinis strain Sample7_7]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATATCACACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGTTGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAATTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5D4P9G2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

61.458

100

0.615