Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   QJS65_RS02050 Genome accession   NZ_CP124831
Coordinates   379620..380048 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus altitudinis strain Sample7_7     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 374620..385048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJS65_RS02020 (QJS65_02020) - 374764..375093 (+) 330 WP_024718960.1 YckD family protein -
  QJS65_RS02025 (QJS65_02025) - 375140..375904 (-) 765 WP_159145385.1 MBL fold metallo-hydrolase -
  QJS65_RS02030 (QJS65_02030) - 376020..376439 (+) 420 WP_024718958.1 Lrp/AsnC family transcriptional regulator -
  QJS65_RS02035 (QJS65_02035) - 376464..377270 (+) 807 WP_282746551.1 AAC(3) family N-acetyltransferase -
  QJS65_RS02040 (QJS65_02040) comJ 377272..377658 (-) 387 WP_039166300.1 competence protein ComJ -
  QJS65_RS02045 (QJS65_02045) - 377796..379493 (-) 1698 WP_282746554.1 methyl-accepting chemotaxis protein -
  QJS65_RS02050 (QJS65_02050) nucA/comI 379620..380048 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QJS65_RS02055 (QJS65_02055) - 380415..382484 (+) 2070 WP_282746557.1 hydantoinase/oxoprolinase family protein -
  QJS65_RS02060 (QJS65_02060) - 382474..384459 (+) 1986 WP_282746559.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=828187 QJS65_RS02050 WP_007498233.1 379620..380048(-) (nucA/comI) [Bacillus altitudinis strain Sample7_7]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=828187 QJS65_RS02050 WP_007498233.1 379620..380048(-) (nucA/comI) [Bacillus altitudinis strain Sample7_7]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGTGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514