Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   H7675_RS03340 Genome accession   NZ_AP023389
Coordinates   644647..645684 (+) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain KUN-0012590     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 639647..650684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7675_RS03315 (KUN2590_05930) - 639911..641242 (+) 1332 WP_030126384.1 dipeptidase -
  H7675_RS03320 (KUN2590_05940) arcC 641262..642212 (+) 951 WP_010922501.1 carbamate kinase -
  H7675_RS03325 (KUN2590_05950) asnA 642525..643517 (+) 993 WP_002983817.1 aspartate--ammonia ligase -
  H7675_RS03330 (KUN2590_05960) rsmD 643640..644179 (+) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H7675_RS03335 (KUN2590_05970) coaD 644169..644660 (+) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  H7675_RS03340 (KUN2590_05980) sepM 644647..645684 (+) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  H7675_RS03345 (KUN2590_05990) - 646106..647083 (+) 978 WP_031577505.1 LacI family DNA-binding transcriptional regulator -
  H7675_RS03350 (KUN2590_06000) - 647531..648151 (+) 621 WP_002992791.1 YutD family protein -
  H7675_RS03355 (KUN2590_06010) rlmN 648155..649234 (+) 1080 WP_031488529.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  H7675_RS03360 - 649316..649942 (-) 627 WP_002983834.1 prepilin peptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=82786 H7675_RS03340 WP_010922499.1 644647..645684(+) (sepM) [Streptococcus pyogenes strain KUN-0012590]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=82786 H7675_RS03340 WP_010922499.1 644647..645684(+) (sepM) [Streptococcus pyogenes strain KUN-0012590]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTATTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTCTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment