Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SGW60_RS00865 Genome accession   NZ_CP138667
Coordinates   138766..139506 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain DA70900     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 133766..144506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW60_RS00840 yhaM 134184..135125 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  SGW60_RS00845 - 135246..136208 (-) 963 WP_000782121.1 foldase protein PrsA -
  SGW60_RS00850 - 136413..136970 (-) 558 WP_000477962.1 DUF3267 domain-containing protein -
  SGW60_RS00855 - 137703..138068 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  SGW60_RS00860 - 138210..138632 (-) 423 WP_000004981.1 HIT family protein -
  SGW60_RS00865 pptA 138766..139506 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  SGW60_RS00870 - 139499..140722 (+) 1224 WP_001245771.1 ABC transporter permease -
  SGW60_RS00875 traP 140846..141349 (-) 504 WP_000737978.1 signal transduction protein TRAP -
  SGW60_RS00880 - 141512..141622 (+) 111 WP_031866187.1 hypothetical protein -
  SGW60_RS00885 hemE 141612..142649 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  SGW60_RS00890 hemH 142707..143630 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=827408 SGW60_RS00865 WP_000216874.1 138766..139506(+) (pptA) [Staphylococcus aureus strain DA70900]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=827408 SGW60_RS00865 WP_000216874.1 138766..139506(+) (pptA) [Staphylococcus aureus strain DA70900]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACATATAGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAAACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545