Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SGW62_RS00915 Genome accession   NZ_CP138662
Coordinates   149498..150238 (+) Length   246 a.a.
NCBI ID   WP_000216873.1    Uniprot ID   -
Organism   Staphylococcus aureus strain DA70520     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 144498..155238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW62_RS00890 yhaM 144916..145857 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  SGW62_RS00895 - 145978..146940 (-) 963 WP_000782127.1 foldase protein PrsA -
  SGW62_RS00900 - 147145..147702 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  SGW62_RS00905 - 148435..148800 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  SGW62_RS00910 - 148942..149364 (-) 423 WP_000004981.1 HIT family protein -
  SGW62_RS00915 pptA 149498..150238 (+) 741 WP_000216873.1 ABC transporter ATP-binding protein Regulator
  SGW62_RS00920 - 150231..151454 (+) 1224 WP_000551840.1 ABC transporter permease -
  SGW62_RS00925 traP 151578..152081 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  SGW62_RS00930 - 152244..152354 (+) 111 WP_001790154.1 hypothetical protein -
  SGW62_RS00935 hemE 152344..153381 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  SGW62_RS00940 hemH 153439..154362 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27701.09 Da        Isoelectric Point: 4.7455

>NTDB_id=827053 SGW62_RS00915 WP_000216873.1 149498..150238(+) (pptA) [Staphylococcus aureus strain DA70520]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHKQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=827053 SGW62_RS00915 WP_000216873.1 149498..150238(+) (pptA) [Staphylococcus aureus strain DA70520]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAAACAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545