Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SGN29_RS08800 Genome accession   NZ_CP138576
Coordinates   1845673..1846413 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MFDS1022333     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1840673..1851413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGN29_RS08775 hemH 1841549..1842472 (-) 924 WP_000162881.1 ferrochelatase -
  SGN29_RS08780 hemE 1842530..1843567 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  SGN29_RS08785 - 1843557..1843667 (-) 111 WP_001790154.1 hypothetical protein -
  SGN29_RS08790 traP 1843830..1844333 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  SGN29_RS08795 ecsB 1844457..1845680 (-) 1224 WP_001245769.1 ABC transporter permease EcsB -
  SGN29_RS08800 pptA 1845673..1846413 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  SGN29_RS08805 - 1846547..1846969 (+) 423 WP_045176861.1 HIT family protein -
  SGN29_RS08810 - 1847111..1847476 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  SGN29_RS08815 - 1848209..1848766 (+) 558 WP_000477957.1 DUF3267 domain-containing protein -
  SGN29_RS08820 - 1848971..1849933 (+) 963 WP_000782121.1 foldase protein PrsA -
  SGN29_RS08825 yhaM 1850054..1850995 (-) 942 WP_001244171.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=826840 SGN29_RS08800 WP_000216874.1 1845673..1846413(-) (pptA) [Staphylococcus aureus strain MFDS1022333]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=826840 SGN29_RS08800 WP_000216874.1 1845673..1846413(-) (pptA) [Staphylococcus aureus strain MFDS1022333]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCTCCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545