Detailed information NTG0826757

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: QF117_RS05095
• Genome accession: NZ_CP124613
• Coordinates: 1144194..1145315 (-)
• Length: 373 a.a.
• NCBI ID: WP_017039652.1
• Uniprot ID: A0A1E5BB42
• Organism: Vibrio sp. YMD68
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1139194..1150315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QF117_RS05080 (QF117_05080)	-	1139466..1140725 (+)	1260	WP_282385111.1	hydroxymethylglutaryl-CoA reductase	-
QF117_RS05085 (QF117_05085)	-	1140885..1141550 (+)	666	WP_282385112.1	flagellar brake protein	-
QF117_RS05090 (QF117_05090)	-	1141567..1144197 (-)	2631	WP_282385114.1	LuxQ periplasmic sensor domain-containing protein	-
QF117_RS05095 (QF117_05095)	luxP	1144194..1145315 (-)	1122	WP_017039652.1	substrate-binding domain-containing protein	Regulator
QF117_RS05100 (QF117_05100)	-	1145498..1146643 (-)	1146	WP_282385117.1	conjugal transfer protein TraF	-
QF117_RS05105 (QF117_05105)	-	1146718..1147038 (-)	321	WP_282385118.1	GIY-YIG nuclease family protein	-
QF117_RS05110 (QF117_05110)	-	1147038..1147709 (-)	672	WP_282385119.1	YceH family protein	-
QF117_RS05115 (QF117_05115)	-	1147761..1148012 (-)	252	WP_282385121.1	hypothetical protein	-
QF117_RS05120 (QF117_05120)	-	1148198..1148515 (+)	318	WP_017033709.1	DUF496 family protein	-
QF117_RS05125 (QF117_05125)	-	1148666..1149184 (-)	519	WP_282385123.1	NUDIX hydrolase	-
QF117_RS05130 (QF117_05130)	-	1149220..1149813 (-)	594	WP_282385125.1	hypothetical protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 42299.92 Da
• Isoelectric Point: 4.9281

>NTDB_id=826757 QF117_RS05095 WP_017039652.1 1144194..1145315(-) (luxP) [Vibrio sp. YMD68]
MISMMPNISRLITLVILLLPSTTVYAHSTQELSDYWGYYEFLEAHPSEYALTNSLATLVSESPKKLSVTQDRPVTISIIY
PGDQISDYWVRNIKAFELRMKELGINYQLKKVVTRINSDVRQQNESLMQALKDKSDYLVFTLYTVRHRKFMEHVLGSTDT
KLILQNITTPVRSWDDRQPFMYVGFDHARGTKLLEQYFKQNIPEKSAYSMLYYSKGYISDARGDTFIQGMSHQGNYTLSS
SFYTQATRESGYQSALRALDNQSDISFIYACSTDVALGAADALKELGRDDVILNGWGGGSAELKAIEMGELDVTVMRMND
DTGIAMAEAIKLDLEGAKVPVLYSGDFEVVTSDDVGQRLDELKRYAFRYSDLE

Nucleotide

• Length: 1122 bp

>NTDB_id=826757 QF117_RS05095 WP_017039652.1 1144194..1145315(-) (luxP) [Vibrio sp. YMD68]
ATGATCTCAATGATGCCAAATATATCGCGTTTAATCACACTTGTTATTTTACTTCTACCCTCGACCACTGTTTACGCGCA
TTCCACACAAGAGCTGTCGGATTACTGGGGTTATTATGAGTTTTTAGAGGCGCACCCCTCCGAATACGCGCTAACGAATT
CATTAGCGACGCTAGTCAGTGAATCGCCGAAAAAGCTGTCTGTCACTCAGGATCGTCCGGTGACTATTTCGATTATTTAC
CCCGGTGATCAGATTTCCGATTATTGGGTGCGAAATATCAAAGCCTTTGAATTGAGAATGAAAGAGCTAGGCATTAATTA
CCAATTAAAAAAGGTGGTGACGCGTATAAACAGCGATGTTCGACAACAAAATGAATCGCTAATGCAAGCGCTTAAAGATA
AATCGGATTACTTAGTTTTTACTTTGTATACCGTTAGACACCGCAAGTTTATGGAGCATGTGTTGGGTTCGACGGACACT
AAGTTGATTCTACAAAATATCACCACACCGGTTCGGTCTTGGGATGATAGGCAGCCTTTTATGTACGTAGGTTTTGATCA
TGCGAGAGGGACCAAGCTTTTAGAACAATATTTTAAGCAAAACATACCTGAAAAGAGCGCGTATTCAATGCTCTATTACT
CAAAGGGATACATCAGTGATGCGCGAGGCGATACCTTTATTCAAGGGATGAGTCACCAAGGCAATTACACGCTTTCGTCC
TCATTTTATACTCAGGCGACGAGAGAGTCAGGCTACCAATCGGCATTACGAGCACTGGACAATCAAAGTGATATTTCATT
TATTTATGCCTGTTCAACTGATGTTGCATTAGGGGCGGCTGACGCATTGAAAGAGCTTGGCCGTGATGACGTTATTCTAA
ACGGTTGGGGAGGCGGCAGCGCAGAACTTAAAGCGATTGAGATGGGTGAGTTAGACGTAACTGTGATGCGAATGAACGAC
GATACGGGCATAGCCATGGCAGAGGCGATTAAACTCGATCTTGAAGGCGCTAAAGTCCCCGTTCTGTATTCTGGTGACTT
TGAGGTCGTCACTTCAGACGATGTTGGTCAGCGTTTAGACGAGCTTAAACGTTATGCATTTAGGTATTCGGATTTAGAAT
GA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (76-335)

3D structure

• AlphaFold DB: A0A1E5BB42

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	60.714	97.587	0.592