Detailed information NTG0826717

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: atcc23344_RS25100
• Genome accession: NZ_CP124608
• Coordinates: 3220270..3221589 (+)
• Length: 439 a.a.
• NCBI ID: WP_004195253.1
• Uniprot ID: A0AAX1X7P9
• Organism: Burkholderia mallei strain ATCC 23344
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3215270..3226589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
atcc23344_RS25070	-	3215781..3216395 (+)	615	WP_004200150.1	50S ribosomal protein L25/general stress protein Ctc	-
atcc23344_RS25075	pth	3216509..3217114 (+)	606	WP_004185241.1	aminoacyl-tRNA hydrolase	-
atcc23344_RS25080	hisC	3217203..3218273 (+)	1071	WP_011204217.1	histidinol-phosphate transaminase	-
atcc23344_RS25085	-	3218452..3218718 (-)	267	WP_004195247.1	YfhL family 4Fe-4S dicluster ferredoxin	-
atcc23344_RS25090	coaD	3218781..3219281 (-)	501	WP_004195249.1	pantetheine-phosphate adenylyltransferase	-
atcc23344_RS25095	rsmD	3219392..3220018 (-)	627	WP_004195251.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
atcc23344_RS25100	pilA	3220270..3221589 (+)	1320	WP_004195253.1	signal recognition particle-docking protein FtsY	Machinery gene
atcc23344_RS25105	maiA	3221746..3222390 (-)	645	WP_004195258.1	maleylacetoacetate isomerase	-
atcc23344_RS25110	nirB	3222775..3225219 (+)	2445	WP_004195264.1	nitrite reductase large subunit NirB	-
atcc23344_RS25115	-	3225288..3225683 (+)	396	WP_011204219.1	nitrite reductase (NAD(P)H) small subunit	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 46404.68 Da
• Isoelectric Point: 6.0726

>NTDB_id=826717 atcc23344_RS25100 WP_004195253.1 3220270..3221589(+) (pilA) [Burkholderia mallei strain ATCC 23344]
MFSFFKRFKKAPDAAPAEPQQAPDAPRDASRAPASPDAARVDAPAAPQPRDERSENHDRPEHDETPTAEHSRSGAQPAAR
ATPPASAAASEAPVGQPRAAAARASEPAPSVVMTVTPSSNGRHGVVETVEIVPPPAPEPAAKKSWIARLKSGLAKTSSSI
TNVFVNTKIDDALYEELETALLMSDAGIDATEHLLDALREKVRAGRLTDPQQVKDALRGLLVELLAPLEKSFVLGRAQPL
VMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVSAARARN
IDVMMADTAGRLPTQLHLMEELRKVKRVIGKAHDGAPHEVLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGG
ILAAIARQRPIPVYFIGIGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1320 bp

>NTDB_id=826717 atcc23344_RS25100 WP_004195253.1 3220270..3221589(+) (pilA) [Burkholderia mallei strain ATCC 23344]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAGCGCCCGATGCCGCCCCGGCCGAGCCGCAGCAAGCGCCCGACGCGCCGCG
GGACGCTTCCCGCGCACCGGCATCGCCCGACGCCGCGCGAGTCGACGCGCCGGCCGCGCCGCAGCCGCGCGACGAGCGCA
GCGAAAACCACGATCGCCCCGAGCACGACGAAACGCCGACCGCCGAGCATTCCCGTTCCGGCGCGCAGCCCGCCGCGCGC
GCGACGCCGCCCGCGTCCGCCGCCGCGTCGGAAGCGCCGGTCGGGCAGCCGCGCGCCGCCGCCGCGCGCGCAAGCGAGCC
CGCGCCGTCGGTCGTGATGACGGTCACGCCGTCGTCGAACGGCCGCCACGGCGTCGTCGAGACGGTCGAGATCGTGCCGC
CGCCCGCGCCCGAGCCGGCCGCGAAGAAATCGTGGATCGCGCGGCTGAAGTCCGGCCTCGCGAAGACGAGCTCGAGCATC
ACGAACGTATTCGTCAACACGAAAATCGACGACGCGCTCTACGAGGAGCTCGAGACGGCGCTGCTGATGTCCGACGCCGG
CATCGACGCGACCGAGCATCTGCTCGACGCGCTGCGCGAAAAGGTGCGCGCGGGCCGCCTCACCGATCCGCAGCAGGTGA
AGGACGCGCTGCGCGGGCTGCTCGTCGAGCTGCTGGCGCCGCTCGAGAAGTCGTTCGTGCTCGGCCGCGCGCAGCCGCTC
GTGATGATGATCGCGGGCGTGAACGGCGCCGGCAAGACGACGAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGA
TCAATCGGTGCTGCTCGCCGCGGGCGACACGTTTCGCGCCGCCGCACGCGAGCAGCTCGCGATCTGGGGCGAACGCAACA
ACGTGACCGTCGTCCAGCAGGAAAGCGGCGACCCCGCCGCGGTGATCTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAAC
ATCGACGTGATGATGGCCGACACCGCAGGCCGCCTGCCGACGCAGCTGCATCTGATGGAAGAGCTCCGGAAGGTGAAGCG
CGTGATCGGCAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCG
CGCAGGTAAAGGCGTTCGACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGC
ATCCTCGCCGCGATCGCGCGCCAGCGGCCGATTCCGGTGTACTTCATCGGCATCGGCGAGAAGGTCGAGGATCTGCAGCC
GTTCAGCGCGGAGGAATTCGCGGACGCGCTGCTCGGCTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (158-218)

• SRP54-type protein, GTPase domain (SRP54) (240-439)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.887	100	0.503