Detailed information NTG0826614

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QI003_RS09480
• Genome accession: NZ_CP124601
• Coordinates: 1905526..1906662 (-)
• Length: 378 a.a.
• NCBI ID: WP_282372175.1
• Uniprot ID: -
• Organism: Bacillus stercoris strain BS21
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1900526..1911662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QI003_RS09450 (QI003_09450)	-	1902278..1902480 (+)	203	Protein_1804	phage holin family protein	-
QI003_RS09455 (QI003_09455)	-	1902523..1903330 (+)	808	Protein_1805	N-acetylmuramoyl-L-alanine amidase	-
QI003_RS09460 (QI003_09460)	-	1903993..1904451 (-)	459	WP_282372173.1	SMI1/KNR4 family protein	-
QI003_RS09465 (QI003_09465)	-	1904466..1904690 (-)	225	Protein_1807	HNH/ENDO VII family nuclease	-
QI003_RS09470 (QI003_09470)	-	1904740..1905318 (+)	579	Protein_1808	UV damage repair protein UvrX	-
QI003_RS09475 (QI003_09475)	-	1905360..1905536 (-)	177	WP_282372174.1	aspartate phosphatase	-
QI003_RS09480 (QI003_09480)	rapC	1905526..1906662 (-)	1137	WP_282372175.1	tetratricopeptide repeat protein	Regulator
QI003_RS09485 (QI003_09485)	-	1906952..1907464 (+)	513	WP_069839407.1	GNAT family protein	-
QI003_RS09490 (QI003_09490)	-	1907745..1908386 (+)	642	WP_282372176.1	DUF3885 domain-containing protein	-
QI003_RS09495 (QI003_09495)	-	1908651..1908815 (+)	165	WP_003231681.1	hypothetical protein	-
QI003_RS09500 (QI003_09500)	-	1909667..1911058 (+)	1392	WP_282372177.1	MFS transporter	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44758.04 Da
• Isoelectric Point: 4.8234

>NTDB_id=826614 QI003_RS09480 WP_282372175.1 1905526..1906662(-) (rapC) [Bacillus stercoris strain BS21]
MEQLIPSSAVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMEEDQDLLLYYSLMCFRHQIMLDYLEPKTMNEERPEIS
DLLEKIESNQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDFPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCLFAEEAYEKAA
EYFKEGIRVYQDNGYEHSNRLLDILLMLTKTTFKMRNHSEGTSWCAHGLSLSKDLNDEIMAKMFEFIHALYVDNDKGKLN
SILNYLELKSMFSDVEDLAADAAKYYNEKEDHKVAVVYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=826614 QI003_RS09480 WP_282372175.1 1905526..1906662(-) (rapC) [Bacillus stercoris strain BS21]
ATGGAGCAATTAATTCCGTCATCCGCAGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCAGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGGAGGAAGACCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAAATAATGCTGGATTACCTTGAACCAAAAACAATGAACGAAGAACGGCCTGAAATTTCA
GACTTATTAGAAAAGATTGAAAGTAACCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGTGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAGATTGAACGAGCAGAATTCCACTACAAAGTTGCAGAAATTTATTATCATATGAAGCAAACTCATATGTCGATGCAT
CACATTGTTCAAGCAATTGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTCATCGG
TCTAAACTATTTGGATATGGACTTCCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTGTACAATCTTGGCTTATGTTTATTTGCTGAGGAAGCTTATGAAAAGGCAGCT
GAGTACTTTAAGGAGGGTATTAGAGTATACCAGGATAATGGGTATGAGCACTCAAATCGTTTATTAGACATCTTACTTAT
GTTGACAAAAACCACATTTAAAATGAGAAATCACTCCGAGGGAACTTCTTGGTGTGCACATGGTCTGTCTTTATCCAAAG
ATTTAAACGATGAGATAATGGCCAAAATGTTTGAATTCATTCATGCCCTATATGTAGATAACGACAAAGGAAAATTAAAT
TCGATTCTAAATTATTTAGAATTAAAGTCAATGTTTTCAGACGTGGAGGATTTAGCAGCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGTTTATTATGAGAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (186-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.413	100	0.484
rapF	Bacillus subtilis subsp. subtilis str. 168	45.263	100	0.455