Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QI003_RS07705 Genome accession   NZ_CP124601
Coordinates   1501644..1502228 (+) Length   194 a.a.
NCBI ID   WP_014663802.1    Uniprot ID   -
Organism   Bacillus stercoris strain BS21     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1496644..1507228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI003_RS07675 (QI003_07675) dapD 1496836..1497546 (+) 711 WP_014663797.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QI003_RS07680 (QI003_07680) - 1497616..1498740 (+) 1125 WP_282374284.1 N-acetyldiaminopimelate deacetylase -
  QI003_RS07685 (QI003_07685) - 1498802..1499047 (+) 246 WP_003232382.1 YkuS family protein -
  QI003_RS07690 (QI003_07690) mscT 1499083..1499886 (-) 804 WP_014663799.1 small-conductance mechanosensitive channel protein MscT -
  QI003_RS07695 (QI003_07695) ahpA 1500124..1500666 (+) 543 WP_014663800.1 biofilm-specific peroxidase AhpA -
  QI003_RS07700 (QI003_07700) ykuV 1500737..1501195 (+) 459 WP_282374285.1 thiol-disulfide oxidoreductase YkuV -
  QI003_RS07705 (QI003_07705) rok 1501644..1502228 (+) 585 WP_014663802.1 transcriptional regulator Rok Regulator
  QI003_RS07710 (QI003_07710) cse15 1502268..1503230 (-) 963 WP_103748822.1 spore protein Cse15 -
  QI003_RS07715 (QI003_07715) - 1503366..1503965 (+) 600 WP_147771844.1 molybdenum cofactor guanylyltransferase -
  QI003_RS07720 (QI003_07720) - 1504016..1505035 (+) 1020 WP_069838841.1 molybdopterin-synthase adenylyltransferase MoeB -
  QI003_RS07725 (QI003_07725) glp 1505053..1506345 (+) 1293 WP_282374286.1 gephyrin-like molybdotransferase Glp -
  QI003_RS07730 (QI003_07730) mobB 1506306..1506827 (+) 522 WP_282374287.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22141.15 Da        Isoelectric Point: 9.7036

>NTDB_id=826608 QI003_RS07705 WP_014663802.1 1501644..1502228(+) (rok) [Bacillus stercoris strain BS21]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIETAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=826608 QI003_RS07705 WP_014663802.1 1501644..1502228(+) (rok) [Bacillus stercoris strain BS21]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAGCCTGACTCTCTGCCTGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTGCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCATAACGCGG
CGATTAAAAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAAACTGCAGA
ATCAGCCGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

99.471

97.423

0.969