Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QI003_RS07605 Genome accession   NZ_CP124601
Coordinates   1485769..1486233 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus stercoris strain BS21     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1480769..1491233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI003_RS07585 (QI003_07585) kinA 1481234..1483054 (+) 1821 WP_014663782.1 sporulation histidine kinase KinA -
  QI003_RS07590 (QI003_07590) - 1483065..1484246 (-) 1182 WP_282374280.1 aminotransferase A -
  QI003_RS07595 (QI003_07595) - 1484448..1484609 (-) 162 WP_003245246.1 hypothetical protein -
  QI003_RS07600 (QI003_07600) cheV 1484814..1485725 (+) 912 WP_071580630.1 chemotaxis protein CheV -
  QI003_RS07605 (QI003_07605) kre 1485769..1486233 (-) 465 WP_003232406.1 YkyB family protein Regulator
  QI003_RS07610 (QI003_07610) - 1486358..1487650 (-) 1293 WP_014663786.1 MFS transporter -
  QI003_RS07615 (QI003_07615) - 1487726..1488220 (-) 495 WP_282374342.1 L,D-transpeptidase family protein -
  QI003_RS07620 (QI003_07620) - 1488278..1489138 (-) 861 WP_282374281.1 metallophosphoesterase -
  QI003_RS07625 (QI003_07625) fadH 1489282..1490046 (+) 765 WP_014663789.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=826607 QI003_RS07605 WP_003232406.1 1485769..1486233(-) (kre) [Bacillus stercoris strain BS21]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=826607 QI003_RS07605 WP_003232406.1 1485769..1486233(-) (kre) [Bacillus stercoris strain BS21]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGTGCTTTGCAAAAGCTCGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTGTTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CTAATCGCCAGCAGCCAGCTTATCACAAACCTGTCTTTAAAAAGCTTGGTGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1