Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QI003_RS04585 Genome accession   NZ_CP124601
Coordinates   939083..939874 (+) Length   263 a.a.
NCBI ID   WP_069149210.1    Uniprot ID   -
Organism   Bacillus stercoris strain BS21     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 934083..944874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI003_RS04555 (QI003_04555) - 934923..935954 (+) 1032 WP_136655060.1 iron ABC transporter permease -
  QI003_RS04560 (QI003_04560) - 936069..936950 (+) 882 WP_282374098.1 PhzF family phenazine biosynthesis isomerase -
  QI003_RS04565 (QI003_04565) - 937038..937622 (+) 585 WP_014663261.1 nitroreductase -
  QI003_RS04570 (QI003_04570) - 937660..937851 (-) 192 WP_014663262.1 YfhD family protein -
  QI003_RS04575 (QI003_04575) - 937918..938028 (-) 111 WP_003223230.1 YfhE family protein -
  QI003_RS04580 (QI003_04580) - 938083..938994 (-) 912 WP_014663263.1 TIGR01777 family oxidoreductase -
  QI003_RS04585 (QI003_04585) recX 939083..939874 (+) 792 WP_069149210.1 recombination regulator RecX Regulator
  QI003_RS04590 (QI003_04590) - 939883..940197 (+) 315 WP_014476208.1 YfhH family protein -
  QI003_RS04595 (QI003_04595) - 940342..941535 (+) 1194 WP_014663266.1 MFS transporter -
  QI003_RS04600 (QI003_04600) - 941567..941719 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QI003_RS04605 (QI003_04605) - 941844..942113 (+) 270 WP_014663267.1 YfhJ family protein -
  QI003_RS04610 (QI003_04610) - 942232..942750 (+) 519 WP_282374099.1 SH3 domain-containing protein -
  QI003_RS04615 (QI003_04615) - 942834..943166 (+) 333 WP_282374100.1 SdpI family protein -
  QI003_RS04620 (QI003_04620) ephM 943153..944013 (+) 861 WP_282374101.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30863.09 Da        Isoelectric Point: 6.6692

>NTDB_id=826590 QI003_RS04585 WP_069149210.1 939083..939874(+) (recX) [Bacillus stercoris strain BS21]
MPFITKISAQKKNTERFNIFLDDKYAFSVDADVLVKYELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVINAALEQIEYENDEDTEKEALRIQAEKALRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLHEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=826590 QI003_RS04585 WP_069149210.1 939083..939874(+) (recX) [Bacillus stercoris strain BS21]
ATGCCGTTTATTACAAAAATATCAGCGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATATGAGCTCAAGAAGGGAAAAGAACTTGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGCGCGCTTGAATTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTC
GAGGACCACTTGAAGAAAAAAGAAACCTCGCCACCCGTCATTGCGGAGGTCATCCATAAGCTCAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACAAACGGAAAAGGACCTGATGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCTTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAAGGCTTCTCATTTGATGTCATCAATGCGGCGCTAGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCATTCAAGCAGAAAAAGCGCTTAGAAAATACCGCTATGACGGCTCCTATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAACAATTTCTGCACGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

95.057

100

0.951