Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QI003_RS01990 Genome accession   NZ_CP124601
Coordinates   388151..388291 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus stercoris strain BS21     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 383151..393291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI003_RS01985 (QI003_01985) srfAB 385015..388107 (+) 3093 Protein_347 surfactin non-ribosomal peptide synthetase SrfAB -
  QI003_RS01990 (QI003_01990) comS 388151..388291 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=826585 QI003_RS01990 WP_010886404.1 388151..388291(+) (comS) [Bacillus stercoris strain BS21]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=826585 QI003_RS01990 WP_010886404.1 388151..388291(+) (comS) [Bacillus stercoris strain BS21]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1