Detailed information NTG0826038

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: SE693_RS05695
• Genome accession: NZ_CP138412
• Coordinates: 1222927..1223910 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain 50EVA
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1217927..1228910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE693_RS05680	dppA	1219227..1220834 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
SE693_RS05685	dppB	1220985..1222004 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
SE693_RS05690	dppC	1222014..1222916 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
SE693_RS05695	amiE	1222927..1223910 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
SE693_RS05700	dppF	1223907..1224911 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
SE693_RS05705	yhjV	1224941..1226212 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
SE693_RS05710	-	1226688..1226795 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SE693_RS05715	-	1227171..1227278 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SE693_RS05720	-	1227654..1227761 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
SE693_RS05725	-	1228137..1228244 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=826038 SE693_RS05695 WP_001196496.1 1222927..1223910(+) (amiE) [Escherichia coli strain 50EVA]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=826038 SE693_RS05695 WP_001196496.1 1222927..1223910(+) (amiE) [Escherichia coli strain 50EVA]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401