Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   SE699_RS02305 Genome accession   NZ_CP138399
Coordinates   480362..481345 (+) Length   327 a.a.
NCBI ID   WP_001196486.1    Uniprot ID   A7ZT85
Organism   Escherichia coli strain 64EVA     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 475362..486345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE699_RS02285 dppA 476505..478112 (+) 1608 WP_001222883.1 dipeptide ABC transporter substrate-binding protein DppA -
  SE699_RS02295 dppB 478420..479439 (+) 1020 WP_000938855.1 dipeptide ABC transporter permease DppB -
  SE699_RS02300 dppC 479449..480351 (+) 903 WP_000084677.1 dipeptide ABC transporter permease DppC -
  SE699_RS02305 amiE 480362..481345 (+) 984 WP_001196486.1 dipeptide ABC transporter ATP-binding protein Regulator
  SE699_RS02310 dppF 481342..482346 (+) 1005 WP_000107012.1 dipeptide ABC transporter ATP-binding subunit DppF -
  SE699_RS02315 yhjV 482376..483647 (-) 1272 WP_001295225.1 aromatic amino acid transport family protein -
  SE699_RS02320 ldrD 484123..484230 (+) 108 WP_000141634.1 type I toxin-antitoxin system toxic polypeptide LdrD -
  SE699_RS02325 bcsG 484317..485996 (-) 1680 WP_074524343.1 cellulose biosynthesis protein BcsG -
  SE699_RS02330 bcsF 485993..486184 (-) 192 WP_000988308.1 cellulose biosynthesis protein BcsF -

Sequence

Protein


Download         Length: 327 a.a.        Molecular weight: 35844.36 Da        Isoelectric Point: 6.5814

>NTDB_id=825870 SE699_RS02305 WP_001196486.1 480362..481345(+) (amiE) [Escherichia coli strain 64EVA]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide


Download         Length: 984 bp        

>NTDB_id=825870 SE699_RS02305 WP_001196486.1 480362..481345(+) (amiE) [Escherichia coli strain 64EVA]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)

ABC transporter (ABC_tran)

(24-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7ZT85

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

43.302

98.165

0.425
  amiE Streptococcus thermophilus LMG 18311

42.991

98.165

0.422
  amiE Streptococcus thermophilus LMD-9

42.991

98.165

0.422
  oppD Streptococcus mutans UA159

41.379

97.554

0.404