Detailed information    

insolico Bioinformatically predicted

Overview


Name   comD/blpH   Type   Regulator
Locus tag   SE933_RS03770 Genome accession   NZ_CP138370
Coordinates   671524..672858 (+) Length   444 a.a.
NCBI ID   WP_001089363.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SagR40     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 666524..677858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE933_RS03755 (SE933_03755) - 667507..669690 (+) 2184 WP_000795065.1 PTS transporter subunit IIBC -
  SE933_RS03760 (SE933_03760) - 669744..670559 (+) 816 WP_001029870.1 endonuclease/exonuclease/phosphatase family protein -
  SE933_RS03765 (SE933_03765) - 670775..671527 (+) 753 Protein_656 response regulator transcription factor -
  SE933_RS03770 (SE933_03770) comD/blpH 671524..672858 (+) 1335 WP_001089363.1 sensor histidine kinase Regulator
  SE933_RS03775 (SE933_03775) - 672947..673111 (-) 165 Protein_658 cysteine peptidase family C39 domain-containing protein -
  SE933_RS03780 (SE933_03780) - 673400..673573 (+) 174 WP_000683598.1 hypothetical protein -
  SE933_RS03785 (SE933_03785) - 673642..674489 (+) 848 Protein_660 ABC transporter ATP-binding protein -
  SE933_RS03790 (SE933_03790) - 674495..675647 (+) 1153 Protein_661 ABC transporter permease subunit -
  SE933_RS03795 (SE933_03795) - 675876..676910 (+) 1035 WP_000369171.1 acyltransferase family protein -
  SE933_RS03800 (SE933_03800) - 677157..677582 (+) 426 WP_000823120.1 PTS mannose transporter subunit IIA -

Sequence


Protein


Download         Length: 444 a.a.        Molecular weight: 51233.02 Da        Isoelectric Point: 8.5194

>NTDB_id=825529 SE933_RS03770 WP_001089363.1 671524..672858(+) (comD/blpH) [Streptococcus agalactiae strain SagR40]
MNSTLSILEIALTIILTIFLFSKISGRQLTLIEIGICIALRLGLVILFIAANTIINLSFLKYWLLPIYMLSLAFLLLRPI
SKTLVVFYGLFPIVLRNLCSRSLAFFVFPLFNIDFHTTNQGFWGYFVDVLSTLCVLLFLRWMQYDFKALRSSEVSPTDRR
ILQFTNGCMVSYYLLMQFLTYFEYELAINTVIYRQFLLVAYWIIFTGAIASLDRRLRNSLQERLAVQRELQLANMIDYSH
HIEGLYKEVRSFRHDYSNMLTTLKLGIDNEDISIVKSVYQSIFKESNTHFRHPKYNIDRLVNVDNPALKSLLAAKLSQAI
ANHIMVSIEVPDSIKPQGMELIDFITIVSVLWDNAIEASLETDDPKIAMSYFTLKHKQIFIIENSTKEKAIDTSTIFNYE
ISSKGRNRGIGLYNVRGVINRYPNISIATSSQDFSFCQTFEIIL

Nucleotide


Download         Length: 1335 bp        

>NTDB_id=825529 SE933_RS03770 WP_001089363.1 671524..672858(+) (comD/blpH) [Streptococcus agalactiae strain SagR40]
ATGAATTCTACTCTATCCATCTTAGAGATAGCTTTAACGATAATATTAACAATATTTCTCTTTTCTAAAATCAGTGGACG
TCAATTAACTTTAATAGAGATTGGAATTTGTATTGCTCTGAGATTAGGACTTGTAATTTTATTTATAGCAGCTAATACTA
TTATTAATCTTTCATTTCTAAAGTACTGGCTTCTCCCCATCTATATGTTAAGTCTGGCTTTCTTGTTGCTAAGACCTATA
TCTAAAACTTTAGTAGTCTTTTATGGCTTGTTTCCAATTGTTCTCAGAAATCTTTGTTCACGTTCTTTAGCTTTTTTTGT
CTTTCCTTTGTTTAATATTGATTTTCATACAACCAACCAGGGGTTTTGGGGATATTTTGTTGATGTCTTGTCTACTCTTT
GTGTTCTCTTATTTTTAAGATGGATGCAATACGATTTTAAAGCATTGCGAAGTAGTGAAGTTTCGCCAACAGATAGGAGA
ATTCTCCAATTTACGAATGGGTGCATGGTGAGTTATTACTTATTGATGCAGTTTTTAACTTACTTCGAATATGAATTAGC
CATCAATACTGTTATTTACCGACAATTTTTGCTTGTTGCTTATTGGATTATATTTACGGGAGCAATAGCCAGTTTAGACC
GGAGACTTCGAAATTCTTTACAGGAGAGGTTAGCTGTTCAAAGAGAACTCCAATTGGCTAATATGATAGATTATAGCCAC
CATATTGAGGGATTGTATAAAGAAGTTAGGAGCTTCCGACATGATTATAGTAACATGTTAACGACCTTGAAACTAGGGAT
TGATAATGAAGATATATCTATTGTCAAATCAGTTTATCAGTCTATCTTTAAAGAATCTAATACACATTTCCGACATCCTA
AGTATAATATAGACCGGTTGGTTAATGTAGATAACCCAGCCTTAAAAAGTCTTTTAGCAGCCAAGCTTTCACAAGCGATA
GCCAATCATATTATGGTATCTATAGAAGTACCAGACAGTATTAAACCTCAAGGGATGGAACTGATTGATTTTATTACCAT
TGTATCTGTTTTATGGGATAACGCTATTGAGGCATCTTTAGAGACAGACGATCCTAAGATAGCCATGTCTTATTTTACAT
TAAAACATAAACAAATTTTTATCATAGAAAATTCAACTAAGGAAAAGGCAATAGATACGTCAACGATATTCAATTATGAG
ATAAGTAGTAAGGGGCGGAATAGAGGAATAGGTCTTTACAATGTCAGGGGAGTTATCAATCGTTATCCAAATATTTCTAT
TGCAACAAGTAGCCAAGATTTTAGTTTCTGCCAAACTTTCGAAATCATATTATAG

Domains


Predicted by InterProScan.

(339-439)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

35.683

100

0.365