Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SE864_RS05885 Genome accession   NZ_CP138369
Coordinates   1155591..1156073 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain SagR31     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1150591..1161073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE864_RS05865 (SE864_05865) alsS 1150850..1152532 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  SE864_RS05870 (SE864_05870) - 1152642..1153868 (-) 1227 WP_000934874.1 hypothetical protein -
  SE864_RS05875 (SE864_05875) - 1153858..1155048 (-) 1191 WP_001081537.1 AI-2E family transporter -
  SE864_RS05880 (SE864_05880) - 1155140..1155601 (-) 462 WP_000796049.1 NUDIX hydrolase -
  SE864_RS05885 (SE864_05885) mutX 1155591..1156073 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  SE864_RS05890 (SE864_05890) hylB 1156291..1158615 (+) 2325 Protein_1085 hyaluronate lyase -
  SE864_RS05895 (SE864_05895) - 1158632..1159435 (-) 804 Protein_1086 transposase family protein -
  SE864_RS05900 (SE864_05900) hylB 1159472..1160368 (+) 897 Protein_1087 hyaluronate lyase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=825441 SE864_RS05885 WP_000163512.1 1155591..1156073(-) (mutX) [Streptococcus agalactiae strain SagR31]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=825441 SE864_RS05885 WP_000163512.1 1155591..1156073(-) (mutX) [Streptococcus agalactiae strain SagR31]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGTGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACGGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTTTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712