Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SE858_RS10625 Genome accession   NZ_CP138368
Coordinates   2081978..2082460 (-) Length   160 a.a.
NCBI ID   WP_000163516.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SagR92     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2076978..2087460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE858_RS10605 (SE858_10605) alsS 2077237..2078919 (-) 1683 WP_000140348.1 acetolactate synthase AlsS -
  SE858_RS10610 (SE858_10610) - 2079029..2080255 (-) 1227 WP_000934876.1 hypothetical protein -
  SE858_RS10615 (SE858_10615) - 2080245..2081435 (-) 1191 WP_001081539.1 AI-2E family transporter -
  SE858_RS10620 (SE858_10620) - 2081527..2081988 (-) 462 WP_000796045.1 NUDIX hydrolase -
  SE858_RS10625 (SE858_10625) mutX 2081978..2082460 (-) 483 WP_000163516.1 8-oxo-dGTP diphosphatase Machinery gene
  SE858_RS10630 (SE858_10630) - 2082677..2083990 (+) 1314 WP_000403407.1 hypothetical protein -
  SE858_RS10635 (SE858_10635) - 2084036..2085169 (+) 1134 WP_000564797.1 ISAs1-like element IS1548 family transposase -
  SE858_RS10640 (SE858_10640) hylB 2085254..2087221 (+) 1968 Protein_2028 hyaluronate lyase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18863.27 Da        Isoelectric Point: 4.4433

>NTDB_id=825375 SE858_RS10625 WP_000163516.1 2081978..2082460(-) (mutX) [Streptococcus agalactiae strain SagR92]
MTKLATICYIDNGKELLLLYRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=825375 SE858_RS10625 WP_000163516.1 2081978..2082460(-) (mutX) [Streptococcus agalactiae strain SagR92]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGTACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706