Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SE858_RS09630 Genome accession   NZ_CP138368
Coordinates   1885455..1886111 (+) Length   218 a.a.
NCBI ID   WP_319163120.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SagR92     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1880455..1891111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE858_RS09610 (SE858_09610) - 1880993..1881482 (-) 490 Protein_1824 PASTA domain-containing protein -
  SE858_RS09615 (SE858_09615) - 1881648..1882610 (+) 963 WP_001253127.1 S41 family peptidase -
  SE858_RS09620 (SE858_09620) - 1882636..1883388 (+) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  SE858_RS09625 (SE858_09625) - 1883390..1885345 (+) 1956 WP_000499553.1 FtsX-like permease family protein -
  SE858_RS09630 (SE858_09630) braR 1885455..1886111 (+) 657 WP_319163120.1 response regulator transcription factor Regulator
  SE858_RS09635 (SE858_09635) - 1886108..1887046 (+) 939 WP_000620981.1 HAMP domain-containing sensor histidine kinase -
  SE858_RS09640 (SE858_09640) xerS 1887089..1888159 (-) 1071 WP_000817930.1 tyrosine recombinase XerS Machinery gene
  SE858_RS09645 (SE858_09645) - 1888612..1890273 (+) 1662 WP_000093960.1 peptide ABC transporter substrate-binding protein -
  SE858_RS09650 (SE858_09650) - 1890306..1891079 (-) 774 WP_000622398.1 DUF3307 domain-containing protein -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 24891.78 Da        Isoelectric Point: 4.6424

>NTDB_id=825366 SE858_RS09630 WP_319163120.1 1885455..1886111(+) (braR) [Streptococcus agalactiae strain SagR92]
MSQEQGKIYIVEDDMTIVSLLKDHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLLPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 657 bp        

>NTDB_id=825366 SE858_RS09630 WP_319163120.1 1885455..1886111(+) (braR) [Streptococcus agalactiae strain SagR92]
ATGTCACAAGAGCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGATCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACTCCCAATAGGTTTTGATTACATTCATACAGTGAGAGGAGTTG
GGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-217)

Response regulator receiver domain (Response_reg)

(8-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.872

100

0.459